WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
CTTGCCACCAAGTCCAACCAAATCAAGCAACTTATCAGAAACGGCAGAAGTGCCAGCCTG

Read1 before filtering:
total reads: 2963703
total bases: 426773232
Q20 bases: 414497590(97.1236%)
Q30 bases: 397849333(93.2227%)

Read1 after filtering:
total reads: 2933425
total bases: 421861399
Q20 bases: 410095908(97.2111%)
Q30 bases: 393764387(93.3398%)

Filtering result:
reads passed filter: 2933425
reads failed due to low quality: 4619
reads failed due to too many N: 1774
reads failed due to too short: 23885
reads with adapter trimmed: 49205
bases trimmed due to adapters: 3989256

Duplication rate (may be overestimated since this is SE data): 73.0727%

JSON report: DabobBayWA_Q238.json
HTML report: DabobBayWA_Q238.html

fastp -i DabobBayWA_Q238.F.fq.gz -o DabobBayWA_Q238.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q238.json -h DabobBayWA_Q238.html 
fastp v0.20.0, time used: 29 seconds