WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
TAGCTCCTAGACCTTTAGCAGCAAGGTCCATATCTGACTTTTTGTTAACGTATTTAGCCA

Read1 before filtering:
total reads: 2399846
total bases: 345577824
Q20 bases: 335539240(97.0951%)
Q30 bases: 321652484(93.0767%)

Read1 after filtering:
total reads: 2376281
total bases: 342161485
Q20 bases: 332479576(97.1704%)
Q30 bases: 318809471(93.1751%)

Filtering result:
reads passed filter: 2376281
reads failed due to low quality: 3327
reads failed due to too many N: 1373
reads failed due to too short: 18865
reads with adapter trimmed: 22121
bases trimmed due to adapters: 2737862

Duplication rate (may be overestimated since this is SE data): 72.3457%

JSON report: DabobBayWA_Q233.json
HTML report: DabobBayWA_Q233.html

fastp -i DabobBayWA_Q233.F.fq.gz -o DabobBayWA_Q233.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q233.json -h DabobBayWA_Q233.html 
fastp v0.20.0, time used: 25 seconds