WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3517032 total bases: 506452608 Q20 bases: 489946703(96.7409%) Q30 bases: 460514570(90.9294%) Read1 after filtering: total reads: 3501334 total bases: 504149382 Q20 bases: 488701586(96.9359%) Q30 bases: 459679052(91.1791%) Filtering result: reads passed filter: 3501334 reads failed due to low quality: 10628 reads failed due to too many N: 5070 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 70.6014% JSON report: DabobBayWA_FG250.json HTML report: DabobBayWA_FG250.html fastp -i DabobBayWA_FG250.F.fq.gz -o DabobBayWA_FG250.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG250.json -h DabobBayWA_FG250.html fastp v0.20.0, time used: 43 seconds