WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3482663
total bases: 501503472
Q20 bases: 482966516(96.3037%)
Q30 bases: 452559553(90.2406%)

Read1 after filtering:
total reads: 3479807
total bases: 500715815
Q20 bases: 482652846(96.3926%)
Q30 bases: 452388734(90.3484%)

Filtering result:
reads passed filter: 3479807
reads failed due to low quality: 1857
reads failed due to too many N: 999
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 38.9825%

JSON report: DabobBayWA_FG215.json
HTML report: DabobBayWA_FG215.html

fastp -i DabobBayWA_FG215.F.fq.gz -o DabobBayWA_FG215.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG215.json -h DabobBayWA_FG215.html 
fastp v0.20.0, time used: 42 seconds