WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 2942326
total bases: 423694944
Q20 bases: 409245093(96.5896%)
Q30 bases: 384172320(90.6719%)

Read1 after filtering:
total reads: 2939940
total bases: 423068952
Q20 bases: 408986576(96.6714%)
Q30 bases: 384026027(90.7715%)

Filtering result:
reads passed filter: 2939940
reads failed due to low quality: 1527
reads failed due to too many N: 859
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 36.6653%

JSON report: DabobBayWA_FG214.json
HTML report: DabobBayWA_FG214.html

fastp -i DabobBayWA_FG214.F.fq.gz -o DabobBayWA_FG214.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG214.json -h DabobBayWA_FG214.html 
fastp v0.20.0, time used: 38 seconds