WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 1442143 total bases: 207668592 Q20 bases: 201156805(96.8643%) Q30 bases: 188972014(90.9969%) Read1 after filtering: total reads: 1441051 total bases: 207447945 Q20 bases: 201049333(96.9156%) Q30 bases: 188902071(91.06%) Filtering result: reads passed filter: 1441051 reads failed due to low quality: 668 reads failed due to too many N: 424 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 42.8217% JSON report: DabobBayWA_FG213.json HTML report: DabobBayWA_FG213.html fastp -i DabobBayWA_FG213.F.fq.gz -o DabobBayWA_FG213.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG213.json -h DabobBayWA_FG213.html fastp v0.20.0, time used: 24 seconds