WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... TAGCATAAGCAGCTTGCAGACCCATAATGTCAATAGATGTGGTAGAAGTCGTCATTTGGC Read1 before filtering: total reads: 2102383 total bases: 302743152 Q20 bases: 294193229(97.1758%) Q30 bases: 282593592(93.3443%) Read1 after filtering: total reads: 2083253 total bases: 299793748 Q20 bases: 291886742(97.3625%) Q30 bases: 280493141(93.562%) Filtering result: reads passed filter: 2083253 reads failed due to low quality: 5611 reads failed due to too many N: 2901 reads failed due to too short: 10618 reads with adapter trimmed: 26091 bases trimmed due to adapters: 1721319 Duplication rate (may be overestimated since this is SE data): 71.6065% JSON report: DabobBayWA_FG207.json HTML report: DabobBayWA_FG207.html fastp -i DabobBayWA_FG207.F.fq.gz -o DabobBayWA_FG207.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG207.json -h DabobBayWA_FG207.html fastp v0.20.0, time used: 20 seconds