WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
TTAAGCTCAGGAAATGCAGCAGCAAGATAATCACGAGTATCCTTTCCTTTATCAGCGGCA

Read1 before filtering:
total reads: 3495808
total bases: 503396352
Q20 bases: 489052637(97.1506%)
Q30 bases: 469689777(93.3042%)

Read1 after filtering:
total reads: 3471706
total bases: 499882478
Q20 bases: 486600274(97.3429%)
Q30 bases: 467531276(93.5282%)

Filtering result:
reads passed filter: 3471706
reads failed due to low quality: 9528
reads failed due to too many N: 4868
reads failed due to too short: 9706
reads with adapter trimmed: 16920
bases trimmed due to adapters: 1438072

Duplication rate (may be overestimated since this is SE data): 67.6189%

JSON report: DabobBayWA_FG206.json
HTML report: DabobBayWA_FG206.html

fastp -i DabobBayWA_FG206.F.fq.gz -o DabobBayWA_FG206.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG206.json -h DabobBayWA_FG206.html 
fastp v0.20.0, time used: 36 seconds