WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
TGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGA

Read1 before filtering:
total reads: 5165707
total bases: 743861808
Q20 bases: 721483536(96.9916%)
Q30 bases: 680194890(91.441%)

Read1 after filtering:
total reads: 5146204
total bases: 740936166
Q20 bases: 719619240(97.123%)
Q30 bases: 678782963(91.6115%)

Filtering result:
reads passed filter: 5146204
reads failed due to low quality: 9880
reads failed due to too many N: 7685
reads failed due to too short: 1938
reads with adapter trimmed: 11585
bases trimmed due to adapters: 193773

Duplication rate (may be overestimated since this is SE data): 60.567%

JSON report: DabobBayWA_241.json
HTML report: DabobBayWA_241.html

fastp -i DabobBayWA_241.F.fq.gz -o DabobBayWA_241.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_241.json -h DabobBayWA_241.html 
fastp v0.20.0, time used: 56 seconds