WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... GATAAACATCATAGGCAGTCGGGAGGGTAGTCGGAACCGAAGAAGACTCAAAGCGAACCA Read1 before filtering: total reads: 2123566 total bases: 305793504 Q20 bases: 296829360(97.0686%) Q30 bases: 284911176(93.1711%) Read1 after filtering: total reads: 2103805 total bases: 302905563 Q20 bases: 294280491(97.1526%) Q30 bases: 282544339(93.278%) Filtering result: reads passed filter: 2103805 reads failed due to low quality: 3371 reads failed due to too many N: 1242 reads failed due to too short: 15148 reads with adapter trimmed: 20981 bases trimmed due to adapters: 2221609 Duplication rate (may be overestimated since this is SE data): 73.2749% JSON report: CypressIslandWA_FG142.json HTML report: CypressIslandWA_FG142.html fastp -i CypressIslandWA_FG142.F.fq.gz -o CypressIslandWA_FG142.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CypressIslandWA_FG142.json -h CypressIslandWA_FG142.html fastp v0.20.0, time used: 21 seconds