WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... TGCGTGTAGCGAACTGCGATGGGCATACTGTAACCATAAGGCCACGTATTTTGCAAGCTA Read1 before filtering: total reads: 3256170 total bases: 468888480 Q20 bases: 455018583(97.042%) Q30 bases: 436481046(93.0885%) Read1 after filtering: total reads: 3238751 total bases: 466358435 Q20 bases: 453465749(97.2355%) Q30 bases: 435177788(93.314%) Filtering result: reads passed filter: 3238751 reads failed due to low quality: 9080 reads failed due to too many N: 4447 reads failed due to too short: 3892 reads with adapter trimmed: 6998 bases trimmed due to adapters: 580105 Duplication rate (may be overestimated since this is SE data): 67.9933% JSON report: CypressIslandWA_FG103-B.json HTML report: CypressIslandWA_FG103-B.html fastp -i CypressIslandWA_FG103-B.F.fq.gz -o CypressIslandWA_FG103-B.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CypressIslandWA_FG103-B.json -h CypressIslandWA_FG103-B.html fastp v0.20.0, time used: 30 seconds