WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... TTAAGCTCAGGAAATGCAGCAGCAAGATAATCACGAGTATCCTTTCCTTTATCAGCGGCA Read1 before filtering: total reads: 3012123 total bases: 433745712 Q20 bases: 421805810(97.2473%) Q30 bases: 405218179(93.423%) Read1 after filtering: total reads: 2994801 total bases: 431223548 Q20 bases: 419759910(97.3416%) Q30 bases: 403395553(93.5467%) Filtering result: reads passed filter: 2994801 reads failed due to low quality: 5027 reads failed due to too many N: 1788 reads failed due to too short: 10507 reads with adapter trimmed: 15163 bases trimmed due to adapters: 1539168 Duplication rate (may be overestimated since this is SE data): 73.3322% JSON report: CatalinaCA_Q357.json HTML report: CatalinaCA_Q357.html fastp -i CatalinaCA_Q357.F.fq.gz -o CatalinaCA_Q357.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_Q357.json -h CatalinaCA_Q357.html fastp v0.20.0, time used: 29 seconds