WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
GTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCG

Read1 before filtering:
total reads: 5204919
total bases: 749508336
Q20 bases: 727216123(97.0258%)
Q30 bases: 697134102(93.0122%)

Read1 after filtering:
total reads: 5167055
total bases: 744010433
Q20 bases: 723349544(97.223%)
Q30 bases: 693727532(93.2416%)

Filtering result:
reads passed filter: 5167055
reads failed due to low quality: 15177
reads failed due to too many N: 6966
reads failed due to too short: 15721
reads with adapter trimmed: 21830
bases trimmed due to adapters: 2304693

Duplication rate (may be overestimated since this is SE data): 69.6384%

JSON report: CatalinaCA_Q330.json
HTML report: CatalinaCA_Q330.html

fastp -i CatalinaCA_Q330.F.fq.gz -o CatalinaCA_Q330.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_Q330.json -h CatalinaCA_Q330.html 
fastp v0.20.0, time used: 49 seconds