WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 1811328
total bases: 260831232
Q20 bases: 252287251(96.7243%)
Q30 bases: 236864436(90.8114%)

Read1 after filtering:
total reads: 1809344
total bases: 260352499
Q20 bases: 252088969(96.826%)
Q30 bases: 236755870(90.9367%)

Filtering result:
reads passed filter: 1809344
reads failed due to low quality: 1420
reads failed due to too many N: 564
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 46.7738%

JSON report: CatalinaCA_395.json
HTML report: CatalinaCA_395.html

fastp -i CatalinaCA_395.F.fq.gz -o CatalinaCA_395.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_395.json -h CatalinaCA_395.html 
fastp v0.20.0, time used: 28 seconds