WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 4997681
total bases: 719666064
Q20 bases: 696527459(96.7848%)
Q30 bases: 655036276(91.0195%)

Read1 after filtering:
total reads: 4994279
total bases: 718637507
Q20 bases: 696118966(96.8665%)
Q30 bases: 654808876(91.1181%)

Filtering result:
reads passed filter: 4994279
reads failed due to low quality: 1933
reads failed due to too many N: 1469
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 43.7797%

JSON report: CatalinaCA_392.json
HTML report: CatalinaCA_392.html

fastp -i CatalinaCA_392.F.fq.gz -o CatalinaCA_392.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_392.json -h CatalinaCA_392.html 
fastp v0.20.0, time used: 55 seconds