WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3354700
total bases: 483076800
Q20 bases: 467362863(96.7471%)
Q30 bases: 439417178(90.9622%)

Read1 after filtering:
total reads: 3352562
total bases: 482548705
Q20 bases: 467128994(96.8045%)
Q30 bases: 439273273(91.0319%)

Filtering result:
reads passed filter: 3352562
reads failed due to low quality: 1194
reads failed due to too many N: 944
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 47.0307%

JSON report: CatalinaCA_391.json
HTML report: CatalinaCA_391.html

fastp -i CatalinaCA_391.F.fq.gz -o CatalinaCA_391.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_391.json -h CatalinaCA_391.html 
fastp v0.20.0, time used: 41 seconds