WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 2840503
total bases: 409032432
Q20 bases: 396544212(96.9469%)
Q30 bases: 372934691(91.1748%)

Read1 after filtering:
total reads: 2838758
total bases: 408613259
Q20 bases: 396353973(96.9998%)
Q30 bases: 372814576(91.239%)

Filtering result:
reads passed filter: 2838758
reads failed due to low quality: 955
reads failed due to too many N: 790
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 44.2672%

JSON report: CatalinaCA_388.json
HTML report: CatalinaCA_388.html

fastp -i CatalinaCA_388.F.fq.gz -o CatalinaCA_388.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_388.json -h CatalinaCA_388.html 
fastp v0.20.0, time used: 36 seconds