WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 2413235
total bases: 347505840
Q20 bases: 336371256(96.7959%)
Q30 bases: 315785691(90.8721%)

Read1 after filtering:
total reads: 2411548
total bases: 347113451
Q20 bases: 336198174(96.8554%)
Q30 bases: 315682091(90.9449%)

Filtering result:
reads passed filter: 2411548
reads failed due to low quality: 1059
reads failed due to too many N: 628
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 45.1583%

JSON report: CatalinaCA_386.json
HTML report: CatalinaCA_386.html

fastp -i CatalinaCA_386.F.fq.gz -o CatalinaCA_386.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_386.json -h CatalinaCA_386.html 
fastp v0.20.0, time used: 33 seconds