WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 5066973
total bases: 729644112
Q20 bases: 702508071(96.2809%)
Q30 bases: 656265123(89.9432%)

Read1 after filtering:
total reads: 5056342
total bases: 727772300
Q20 bases: 701674587(96.414%)
Q30 bases: 655800884(90.1107%)

Filtering result:
reads passed filter: 5056342
reads failed due to low quality: 9118
reads failed due to too many N: 1513
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 45.9393%

JSON report: CatalinaCA_378.json
HTML report: CatalinaCA_378.html

fastp -i CatalinaCA_378.F.fq.gz -o CatalinaCA_378.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_378.json -h CatalinaCA_378.html 
fastp v0.20.0, time used: 57 seconds