Left read files: $VAR1 = [ '/gscratch/srlab/sr320/data/crab/304428_S1_L001_R1_001.fastq', '/gscratch/srlab/sr320/data/crab/304428_S1_L002_R1_001.fastq' ]; Right read files: $VAR1 = [ '/gscratch/srlab/sr320/data/crab/304428_S1_L001_R2_001.fastq', '/gscratch/srlab/sr320/data/crab/304428_S1_L002_R2_001.fastq' ]; Trinity version: Trinity-v2.4.0 -ERROR: couldn't run the network check to confirm latest Trinity software version. Friday, October 26, 2018: 06:20:40 CMD: java -Xmx64m -XX:ParallelGCThreads=2 -jar /gscratch/srlab/programs/trinity/util/support_scripts/ExitTester.jar 0 Friday, October 26, 2018: 06:20:41 CMD: java -Xmx64m -XX:ParallelGCThreads=2 -jar /gscratch/srlab/programs/trinity/util/support_scripts/ExitTester.jar 1 Error, cannot locate file: /gscratch/srlab/sr320/data/crab/304428_S1_L001_R1_001.fastq at /gscratch/srlab/programs/trinity/Trinity line 2429. main::create_full_path('ARRAY(0x1463c90)', 1) called at /gscratch/srlab/programs/trinity/Trinity line 1159