Total number of alignments analysed in /gscratch/srlab/sr320/analyses/1002/20150414_trimmed_2112_lane1_HB2_Oil_25000ppm_ATCACG_bismark_bt2.bam:	5065524
Total number duplicated alignments removed:	1012120 (19.98%)
Duplicated alignments were found at:	703343 different position(s)

Total count of deduplicated leftover sequences: 4053404 (80.02% of total)