Total number of alignments analysed in /gscratch/srlab/sr320/analyses/1002/20150414_trimmed_2112_lane1_HB16_Oil_25000ppm_TTAGGC_bismark_bt2.bam:	2514460
Total number duplicated alignments removed:	736852 (29.30%)
Duplicated alignments were found at:	407048 different position(s)

Total count of deduplicated leftover sequences: 1777608 (70.70% of total)