EPI-193_S22_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 8170923 lines in total Total number of methylation call strings processed: 16341846 Final Cytosine Methylation Report ================================= Total number of C's analysed: 156322050 Total methylated C's in CpG context: 6612365 Total methylated C's in CHG context: 770831 Total methylated C's in CHH context: 2168983 Total C to T conversions in CpG context: 15198462 Total C to T conversions in CHG context: 31981857 Total C to T conversions in CHH context: 99589552 C methylated in CpG context: 30.3% C methylated in CHG context: 2.4% C methylated in CHH context: 2.1%