EPI-229_S36_L004_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 6036266 lines in total Total number of methylation call strings processed: 12072532 Final Cytosine Methylation Report ================================= Total number of C's analysed: 120448317 Total methylated C's in CpG context: 5162434 Total methylated C's in CHG context: 610621 Total methylated C's in CHH context: 1841547 Total C to T conversions in CpG context: 11661347 Total C to T conversions in CHG context: 24880747 Total C to T conversions in CHH context: 76291621 C methylated in CpG context: 30.7% C methylated in CHG context: 2.4% C methylated in CHH context: 2.4%