EPI-214_S30_L004_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 8703878 lines in total Total number of methylation call strings processed: 17407756 Final Cytosine Methylation Report ================================= Total number of C's analysed: 181129898 Total methylated C's in CpG context: 7299763 Total methylated C's in CHG context: 895027 Total methylated C's in CHH context: 2311106 Total C to T conversions in CpG context: 17951668 Total C to T conversions in CHG context: 36965157 Total C to T conversions in CHH context: 115707177 C methylated in CpG context: 28.9% C methylated in CHG context: 2.4% C methylated in CHH context: 2.0%