CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 0 34 0.00 34 2 0 43 0.00 43 3 0 42 0.00 42 4 0 14 0.00 14 5 0 12 0.00 12 6 0 10 0.00 10 7 0 20 0.00 20 8 0 12 0.00 12 9 0 19 0.00 19 10 0 22 0.00 22 11 0 19 0.00 19 12 0 21 0.00 21 13 0 10 0.00 10 14 0 21 0.00 21 15 0 14 0.00 14 16 0 18 0.00 18 17 0 21 0.00 21 18 0 13 0.00 13 19 1 24 4.00 25 20 0 20 0.00 20 21 0 33 0.00 33 22 0 17 0.00 17 23 0 17 0.00 17 24 0 20 0.00 20 25 0 22 0.00 22 26 0 18 0.00 18 27 0 28 0.00 28 28 0 14 0.00 14 29 0 13 0.00 13 30 0 26 0.00 26 31 1 11 8.33 12 32 0 22 0.00 22 33 0 15 0.00 15 34 0 14 0.00 14 35 0 23 0.00 23 36 0 15 0.00 15 37 0 25 0.00 25 38 0 18 0.00 18 39 0 20 0.00 20 40 0 16 0.00 16 41 0 15 0.00 15 42 0 16 0.00 16 43 0 18 0.00 18 44 0 16 0.00 16 45 2 14 12.50 16 46 0 11 0.00 11 47 0 17 0.00 17 48 0 15 0.00 15 49 0 16 0.00 16 50 0 20 0.00 20 51 0 11 0.00 11 52 0 18 0.00 18 53 0 13 0.00 13 54 0 22 0.00 22 55 0 24 0.00 24 56 0 20 0.00 20 57 1 17 5.56 18 58 0 22 0.00 22 59 0 23 0.00 23 60 0 14 0.00 14 61 0 14 0.00 14 62 0 16 0.00 16 63 0 20 0.00 20 64 0 12 0.00 12 65 0 22 0.00 22 66 0 16 0.00 16 67 0 15 0.00 15 68 0 16 0.00 16 69 0 11 0.00 11 70 0 10 0.00 10 71 0 12 0.00 12 72 0 12 0.00 12 73 0 22 0.00 22 74 0 19 0.00 19 75 0 17 0.00 17 76 0 10 0.00 10 77 0 16 0.00 16 78 0 16 0.00 16 79 0 14 0.00 14 80 0 22 0.00 22 81 1 20 4.76 21 82 0 11 0.00 11 83 0 15 0.00 15 84 1 6 14.29 7 85 0 10 0.00 10 86 0 10 0.00 10 87 0 15 0.00 15 88 0 11 0.00 11 89 0 9 0.00 9 90 1 11 8.33 12 91 0 16 0.00 16 92 0 11 0.00 11 93 0 13 0.00 13 94 0 10 0.00 10 95 0 7 0.00 7 96 0 6 0.00 6 97 0 9 0.00 9 98 1 9 10.00 10 99 0 12 0.00 12 100 0 12 0.00 12 101 1 15 6.25 16 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 18 10 64.29 28 2 11 8 57.89 19 3 2 14 12.50 16 4 3 16 15.79 19 5 0 17 0.00 17 6 2 11 15.38 13 7 0 29 0.00 29 8 0 18 0.00 18 9 0 15 0.00 15 10 1 16 5.88 17 11 0 23 0.00 23 12 1 12 7.69 13 13 0 14 0.00 14 14 0 14 0.00 14 15 0 12 0.00 12 16 0 24 0.00 24 17 0 18 0.00 18 18 0 25 0.00 25 19 0 20 0.00 20 20 0 22 0.00 22 21 1 15 6.25 16 22 0 17 0.00 17 23 0 21 0.00 21 24 0 18 0.00 18 25 0 22 0.00 22 26 0 19 0.00 19 27 0 18 0.00 18 28 1 15 6.25 16 29 0 24 0.00 24 30 0 25 0.00 25 31 1 14 6.67 15 32 1 16 5.88 17 33 0 19 0.00 19 34 1 26 3.70 27 35 1 11 8.33 12 36 0 26 0.00 26 37 0 26 0.00 26 38 0 19 0.00 19 39 0 17 0.00 17 40 0 15 0.00 15 41 0 21 0.00 21 42 0 27 0.00 27 43 0 20 0.00 20 44 1 19 5.00 20 45 0 17 0.00 17 46 2 17 10.53 19 47 0 16 0.00 16 48 0 14 0.00 14 49 1 24 4.00 25 50 0 16 0.00 16 51 0 15 0.00 15 52 0 20 0.00 20 53 0 26 0.00 26 54 0 17 0.00 17 55 0 15 0.00 15 56 0 16 0.00 16 57 1 19 5.00 20 58 0 17 0.00 17 59 0 15 0.00 15 60 0 23 0.00 23 61 1 22 4.35 23 62 0 10 0.00 10 63 0 18 0.00 18 64 1 18 5.26 19 65 0 12 0.00 12 66 0 19 0.00 19 67 0 16 0.00 16 68 0 15 0.00 15 69 1 20 4.76 21 70 0 23 0.00 23 71 1 10 9.09 11 72 0 18 0.00 18 73 0 13 0.00 13 74 0 15 0.00 15 75 0 13 0.00 13 76 2 9 18.18 11 77 0 14 0.00 14 78 0 14 0.00 14 79 0 12 0.00 12 80 0 12 0.00 12 81 0 15 0.00 15 82 1 11 8.33 12 83 0 15 0.00 15 84 0 14 0.00 14 85 1 7 12.50 8 86 0 11 0.00 11 87 0 16 0.00 16 88 0 12 0.00 12 89 1 10 9.09 11 90 1 8 11.11 9 91 0 9 0.00 9 92 2 11 15.38 13 93 0 9 0.00 9 94 0 12 0.00 12 95 0 17 0.00 17 96 0 9 0.00 9 97 1 9 10.00 10 98 1 5 16.67 6 99 1 3 25.00 4 100 0 10 0.00 10 101 2 12 14.29 14 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 7 5 58.33 12 2 0 13 0.00 13 3 0 17 0.00 17 4 2 20 9.09 22 5 0 35 0.00 35 6 0 30 0.00 30 7 1 30 3.23 31 8 0 25 0.00 25 9 1 23 4.17 24 10 0 24 0.00 24 11 2 22 8.33 24 12 0 23 0.00 23 13 0 22 0.00 22 14 0 28 0.00 28 15 0 24 0.00 24 16 0 32 0.00 32 17 0 23 0.00 23 18 1 22 4.35 23 19 0 29 0.00 29 20 1 20 4.76 21 21 1 24 4.00 25 22 1 29 3.33 30 23 0 26 0.00 26 24 0 28 0.00 28 25 0 34 0.00 34 26 0 29 0.00 29 27 0 27 0.00 27 28 1 34 2.86 35 29 1 42 2.33 43 30 0 28 0.00 28 31 0 32 0.00 32 32 0 38 0.00 38 33 0 40 0.00 40 34 0 30 0.00 30 35 0 28 0.00 28 36 0 20 0.00 20 37 0 24 0.00 24 38 0 24 0.00 24 39 0 26 0.00 26 40 0 30 0.00 30 41 1 27 3.57 28 42 1 33 2.94 34 43 0 28 0.00 28 44 0 26 0.00 26 45 0 30 0.00 30 46 0 40 0.00 40 47 0 31 0.00 31 48 1 34 2.86 35 49 0 24 0.00 24 50 0 24 0.00 24 51 0 28 0.00 28 52 0 35 0.00 35 53 0 30 0.00 30 54 0 26 0.00 26 55 1 29 3.33 30 56 1 26 3.70 27 57 1 34 2.86 35 58 0 29 0.00 29 59 0 29 0.00 29 60 0 33 0.00 33 61 2 25 7.41 27 62 1 29 3.33 30 63 0 29 0.00 29 64 0 25 0.00 25 65 1 23 4.17 24 66 0 25 0.00 25 67 0 27 0.00 27 68 0 21 0.00 21 69 0 12 0.00 12 70 0 16 0.00 16 71 1 21 4.55 22 72 0 31 0.00 31 73 0 22 0.00 22 74 0 25 0.00 25 75 0 18 0.00 18 76 0 20 0.00 20 77 0 23 0.00 23 78 0 19 0.00 19 79 0 18 0.00 18 80 0 13 0.00 13 81 0 20 0.00 20 82 0 19 0.00 19 83 1 15 6.25 16 84 1 18 5.26 19 85 0 18 0.00 18 86 0 16 0.00 16 87 0 15 0.00 15 88 0 24 0.00 24 89 0 10 0.00 10 90 0 12 0.00 12 91 0 10 0.00 10 92 0 9 0.00 9 93 1 13 7.14 14 94 0 13 0.00 13 95 0 12 0.00 12 96 0 16 0.00 16 97 0 15 0.00 15 98 0 11 0.00 11 99 0 16 0.00 16 100 0 13 0.00 13 101 0 12 0.00 12 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 14 6.67 15 2 0 7 0.00 7 3 2 12 14.29 14 4 1 10 9.09 11 5 0 10 0.00 10 6 1 9 10.00 10 7 0 7 0.00 7 8 0 12 0.00 12 9 0 11 0.00 11 10 0 10 0.00 10 11 0 9 0.00 9 12 0 9 0.00 9 13 0 9 0.00 9 14 0 7 0.00 7 15 0 8 0.00 8 16 0 8 0.00 8 17 0 10 0.00 10 18 0 14 0.00 14 19 0 5 0.00 5 20 0 3 0.00 3 21 0 9 0.00 9 22 0 3 0.00 3 23 0 4 0.00 4 24 0 10 0.00 10 25 0 11 0.00 11 26 0 13 0.00 13 27 0 7 0.00 7 28 0 5 0.00 5 29 0 8 0.00 8 30 0 8 0.00 8 31 0 8 0.00 8 32 0 15 0.00 15 33 0 3 0.00 3 34 0 3 0.00 3 35 0 6 0.00 6 36 0 3 0.00 3 37 0 3 0.00 3 38 0 3 0.00 3 39 0 5 0.00 5 40 0 8 0.00 8 41 0 5 0.00 5 42 0 8 0.00 8 43 0 4 0.00 4 44 0 5 0.00 5 45 0 3 0.00 3 46 0 2 0.00 2 47 0 4 0.00 4 48 0 5 0.00 5 49 0 9 0.00 9 50 0 4 0.00 4 51 0 3 0.00 3 52 0 5 0.00 5 53 0 1 0.00 1 54 0 3 0.00 3 55 0 2 0.00 2 56 0 2 0.00 2 57 0 2 0.00 2 58 0 2 0.00 2 59 0 0 0 60 0 2 0.00 2 61 0 1 0.00 1 62 0 4 0.00 4 63 0 3 0.00 3 64 0 4 0.00 4 65 0 4 0.00 4 66 0 3 0.00 3 67 0 3 0.00 3 68 0 3 0.00 3 69 0 1 0.00 1 70 0 5 0.00 5 71 0 4 0.00 4 72 0 1 0.00 1 73 0 2 0.00 2 74 0 2 0.00 2 75 0 1 0.00 1 76 0 1 0.00 1 77 0 4 0.00 4 78 0 2 0.00 2 79 0 3 0.00 3 80 0 2 0.00 2 81 0 3 0.00 3 82 1 1 50.00 2 83 0 2 0.00 2 84 0 1 0.00 1 85 0 2 0.00 2 86 0 1 0.00 1 87 0 1 0.00 1 88 0 1 0.00 1 89 0 1 0.00 1 90 0 4 0.00 4 91 0 3 0.00 3 92 0 0 0 93 0 0 0 94 0 2 0.00 2 95 0 1 0.00 1 96 0 2 0.00 2 97 0 2 0.00 2 98 0 2 0.00 2 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 2 8 20.00 10 2 0 3 0.00 3 3 1 15 6.25 16 4 5 9 35.71 14 5 1 12 7.69 13 6 0 2 0.00 2 7 0 9 0.00 9 8 0 7 0.00 7 9 0 6 0.00 6 10 1 3 25.00 4 11 0 7 0.00 7 12 0 6 0.00 6 13 0 3 0.00 3 14 0 9 0.00 9 15 0 11 0.00 11 16 0 3 0.00 3 17 1 6 14.29 7 18 0 8 0.00 8 19 0 9 0.00 9 20 0 5 0.00 5 21 0 10 0.00 10 22 0 4 0.00 4 23 0 5 0.00 5 24 0 4 0.00 4 25 0 5 0.00 5 26 0 7 0.00 7 27 0 4 0.00 4 28 0 9 0.00 9 29 0 10 0.00 10 30 2 4 33.33 6 31 0 2 0.00 2 32 0 8 0.00 8 33 1 9 10.00 10 34 0 5 0.00 5 35 0 5 0.00 5 36 0 4 0.00 4 37 0 2 0.00 2 38 0 8 0.00 8 39 0 5 0.00 5 40 0 3 0.00 3 41 0 7 0.00 7 42 0 6 0.00 6 43 0 6 0.00 6 44 0 4 0.00 4 45 0 2 0.00 2 46 0 3 0.00 3 47 0 1 0.00 1 48 0 8 0.00 8 49 0 3 0.00 3 50 0 6 0.00 6 51 0 4 0.00 4 52 0 5 0.00 5 53 0 3 0.00 3 54 0 5 0.00 5 55 0 7 0.00 7 56 0 3 0.00 3 57 0 5 0.00 5 58 0 2 0.00 2 59 0 4 0.00 4 60 0 0 0 61 0 4 0.00 4 62 0 1 0.00 1 63 0 6 0.00 6 64 0 4 0.00 4 65 0 0 0 66 1 3 25.00 4 67 1 2 33.33 3 68 2 1 66.67 3 69 1 1 50.00 2 70 0 3 0.00 3 71 0 4 0.00 4 72 0 4 0.00 4 73 0 5 0.00 5 74 0 0 0 75 0 5 0.00 5 76 0 0 0 77 0 5 0.00 5 78 0 0 0 79 0 2 0.00 2 80 0 1 0.00 1 81 0 1 0.00 1 82 0 1 0.00 1 83 0 1 0.00 1 84 0 4 0.00 4 85 0 4 0.00 4 86 0 2 0.00 2 87 0 2 0.00 2 88 0 2 0.00 2 89 0 2 0.00 2 90 0 2 0.00 2 91 0 3 0.00 3 92 0 3 0.00 3 93 0 1 0.00 1 94 0 0 0 95 0 2 0.00 2 96 0 1 0.00 1 97 0 0 0 98 0 3 0.00 3 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 0 3 0.00 3 2 0 3 0.00 3 3 0 3 0.00 3 4 1 3 25.00 4 5 0 12 0.00 12 6 0 11 0.00 11 7 0 11 0.00 11 8 0 14 0.00 14 9 0 19 0.00 19 10 0 22 0.00 22 11 1 15 6.25 16 12 0 15 0.00 15 13 0 13 0.00 13 14 0 15 0.00 15 15 1 7 12.50 8 16 0 13 0.00 13 17 0 18 0.00 18 18 0 14 0.00 14 19 0 10 0.00 10 20 0 7 0.00 7 21 1 7 12.50 8 22 1 12 7.69 13 23 0 14 0.00 14 24 1 8 11.11 9 25 0 10 0.00 10 26 0 11 0.00 11 27 0 12 0.00 12 28 0 11 0.00 11 29 0 11 0.00 11 30 0 7 0.00 7 31 0 9 0.00 9 32 0 7 0.00 7 33 0 9 0.00 9 34 0 11 0.00 11 35 1 10 9.09 11 36 0 9 0.00 9 37 0 10 0.00 10 38 0 11 0.00 11 39 0 10 0.00 10 40 0 7 0.00 7 41 0 5 0.00 5 42 0 5 0.00 5 43 0 9 0.00 9 44 0 4 0.00 4 45 0 12 0.00 12 46 0 5 0.00 5 47 0 7 0.00 7 48 0 7 0.00 7 49 1 8 11.11 9 50 0 7 0.00 7 51 0 7 0.00 7 52 0 2 0.00 2 53 0 4 0.00 4 54 0 8 0.00 8 55 0 7 0.00 7 56 0 14 0.00 14 57 0 10 0.00 10 58 0 6 0.00 6 59 0 4 0.00 4 60 0 11 0.00 11 61 0 5 0.00 5 62 0 5 0.00 5 63 0 5 0.00 5 64 0 2 0.00 2 65 0 1 0.00 1 66 0 5 0.00 5 67 0 4 0.00 4 68 0 7 0.00 7 69 0 5 0.00 5 70 0 6 0.00 6 71 0 4 0.00 4 72 0 2 0.00 2 73 0 2 0.00 2 74 0 3 0.00 3 75 0 4 0.00 4 76 0 4 0.00 4 77 0 4 0.00 4 78 0 6 0.00 6 79 0 6 0.00 6 80 0 7 0.00 7 81 0 6 0.00 6 82 0 3 0.00 3 83 0 5 0.00 5 84 0 5 0.00 5 85 0 4 0.00 4 86 0 1 0.00 1 87 0 7 0.00 7 88 0 4 0.00 4 89 0 0 0 90 0 2 0.00 2 91 0 4 0.00 4 92 0 9 0.00 9 93 0 5 0.00 5 94 0 6 0.00 6 95 0 4 0.00 4 96 0 3 0.00 3 97 0 4 0.00 4 98 0 8 0.00 8