CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1 52 1.89 53 2 1 42 2.33 43 3 0 52 0.00 52 4 1 21 4.55 22 5 0 27 0.00 27 6 0 16 0.00 16 7 0 20 0.00 20 8 1 16 5.88 17 9 0 26 0.00 26 10 0 16 0.00 16 11 0 21 0.00 21 12 0 25 0.00 25 13 0 15 0.00 15 14 0 28 0.00 28 15 0 17 0.00 17 16 0 18 0.00 18 17 1 24 4.00 25 18 0 21 0.00 21 19 1 22 4.35 23 20 0 26 0.00 26 21 0 31 0.00 31 22 0 22 0.00 22 23 0 29 0.00 29 24 0 26 0.00 26 25 0 22 0.00 22 26 0 20 0.00 20 27 1 27 3.57 28 28 0 25 0.00 25 29 1 24 4.00 25 30 0 27 0.00 27 31 0 27 0.00 27 32 0 22 0.00 22 33 1 28 3.45 29 34 0 20 0.00 20 35 0 23 0.00 23 36 0 24 0.00 24 37 0 25 0.00 25 38 0 25 0.00 25 39 0 22 0.00 22 40 0 19 0.00 19 41 0 18 0.00 18 42 0 30 0.00 30 43 0 16 0.00 16 44 0 13 0.00 13 45 0 25 0.00 25 46 1 15 6.25 16 47 0 22 0.00 22 48 1 14 6.67 15 49 0 34 0.00 34 50 1 25 3.85 26 51 0 19 0.00 19 52 0 23 0.00 23 53 1 14 6.67 15 54 0 24 0.00 24 55 2 17 10.53 19 56 2 21 8.70 23 57 0 18 0.00 18 58 0 21 0.00 21 59 1 29 3.33 30 60 1 31 3.12 32 61 0 15 0.00 15 62 0 20 0.00 20 63 0 14 0.00 14 64 0 15 0.00 15 65 0 15 0.00 15 66 0 15 0.00 15 67 0 26 0.00 26 68 0 17 0.00 17 69 0 18 0.00 18 70 0 11 0.00 11 71 0 14 0.00 14 72 0 14 0.00 14 73 0 17 0.00 17 74 1 21 4.55 22 75 0 13 0.00 13 76 0 13 0.00 13 77 0 11 0.00 11 78 1 16 5.88 17 79 0 12 0.00 12 80 0 15 0.00 15 81 0 20 0.00 20 82 0 16 0.00 16 83 0 21 0.00 21 84 0 11 0.00 11 85 1 10 9.09 11 86 0 8 0.00 8 87 1 12 7.69 13 88 0 11 0.00 11 89 0 16 0.00 16 90 0 16 0.00 16 91 0 10 0.00 10 92 0 14 0.00 14 93 0 11 0.00 11 94 1 8 11.11 9 95 0 9 0.00 9 96 0 4 0.00 4 97 0 10 0.00 10 98 0 15 0.00 15 99 0 6 0.00 6 100 0 17 0.00 17 101 0 9 0.00 9 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 18 13 58.06 31 2 19 12 61.29 31 3 3 17 15.00 20 4 4 21 16.00 25 5 0 17 0.00 17 6 0 11 0.00 11 7 1 28 3.45 29 8 0 21 0.00 21 9 0 19 0.00 19 10 1 30 3.23 31 11 0 23 0.00 23 12 0 22 0.00 22 13 1 23 4.17 24 14 1 19 5.00 20 15 0 20 0.00 20 16 0 25 0.00 25 17 0 30 0.00 30 18 0 22 0.00 22 19 0 19 0.00 19 20 0 22 0.00 22 21 0 34 0.00 34 22 0 30 0.00 30 23 0 23 0.00 23 24 0 19 0.00 19 25 0 27 0.00 27 26 0 26 0.00 26 27 0 27 0.00 27 28 1 31 3.12 32 29 0 25 0.00 25 30 1 18 5.26 19 31 1 26 3.70 27 32 0 21 0.00 21 33 1 30 3.23 31 34 0 22 0.00 22 35 0 25 0.00 25 36 0 21 0.00 21 37 1 25 3.85 26 38 0 17 0.00 17 39 0 17 0.00 17 40 0 24 0.00 24 41 1 32 3.03 33 42 0 25 0.00 25 43 0 23 0.00 23 44 0 16 0.00 16 45 0 20 0.00 20 46 1 28 3.45 29 47 0 18 0.00 18 48 0 19 0.00 19 49 0 16 0.00 16 50 0 24 0.00 24 51 1 23 4.17 24 52 0 22 0.00 22 53 0 28 0.00 28 54 0 29 0.00 29 55 0 25 0.00 25 56 1 19 5.00 20 57 2 21 8.70 23 58 0 17 0.00 17 59 0 18 0.00 18 60 0 18 0.00 18 61 0 24 0.00 24 62 1 19 5.00 20 63 0 20 0.00 20 64 1 24 4.00 25 65 0 9 0.00 9 66 0 18 0.00 18 67 0 15 0.00 15 68 0 15 0.00 15 69 1 14 6.67 15 70 1 22 4.35 23 71 0 15 0.00 15 72 1 23 4.17 24 73 0 18 0.00 18 74 0 19 0.00 19 75 0 7 0.00 7 76 0 11 0.00 11 77 0 13 0.00 13 78 0 17 0.00 17 79 0 13 0.00 13 80 1 12 7.69 13 81 0 13 0.00 13 82 0 21 0.00 21 83 0 14 0.00 14 84 0 13 0.00 13 85 0 16 0.00 16 86 0 16 0.00 16 87 0 8 0.00 8 88 1 11 8.33 12 89 1 8 11.11 9 90 2 17 10.53 19 91 0 17 0.00 17 92 1 9 10.00 10 93 0 12 0.00 12 94 0 16 0.00 16 95 0 21 0.00 21 96 1 12 7.69 13 97 0 9 0.00 9 98 1 7 12.50 8 99 0 8 0.00 8 100 1 8 11.11 9 101 0 8 0.00 8 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 6 8 42.86 14 2 1 5 16.67 6 3 1 26 3.70 27 4 0 14 0.00 14 5 2 32 5.88 34 6 2 32 5.88 34 7 1 46 2.13 47 8 1 27 3.57 28 9 1 32 3.03 33 10 1 29 3.33 30 11 0 25 0.00 25 12 1 33 2.94 34 13 0 34 0.00 34 14 0 38 0.00 38 15 0 46 0.00 46 16 1 50 1.96 51 17 0 39 0.00 39 18 1 36 2.70 37 19 0 42 0.00 42 20 0 39 0.00 39 21 0 35 0.00 35 22 0 36 0.00 36 23 0 32 0.00 32 24 0 46 0.00 46 25 0 52 0.00 52 26 0 48 0.00 48 27 0 38 0.00 38 28 0 36 0.00 36 29 0 54 0.00 54 30 0 46 0.00 46 31 1 45 2.17 46 32 1 35 2.78 36 33 0 46 0.00 46 34 2 47 4.08 49 35 0 40 0.00 40 36 1 42 2.33 43 37 0 35 0.00 35 38 0 45 0.00 45 39 1 28 3.45 29 40 0 39 0.00 39 41 0 44 0.00 44 42 0 28 0.00 28 43 0 36 0.00 36 44 0 40 0.00 40 45 2 38 5.00 40 46 0 43 0.00 43 47 1 44 2.22 45 48 0 38 0.00 38 49 0 40 0.00 40 50 2 36 5.26 38 51 0 42 0.00 42 52 0 39 0.00 39 53 0 33 0.00 33 54 1 36 2.70 37 55 0 27 0.00 27 56 1 32 3.03 33 57 1 33 2.94 34 58 0 28 0.00 28 59 0 24 0.00 24 60 1 35 2.78 36 61 1 29 3.33 30 62 1 16 5.88 17 63 0 31 0.00 31 64 1 32 3.03 33 65 0 21 0.00 21 66 0 33 0.00 33 67 0 29 0.00 29 68 0 28 0.00 28 69 0 33 0.00 33 70 1 27 3.57 28 71 0 25 0.00 25 72 0 22 0.00 22 73 0 17 0.00 17 74 1 20 4.76 21 75 1 22 4.35 23 76 0 28 0.00 28 77 0 24 0.00 24 78 0 27 0.00 27 79 0 30 0.00 30 80 0 27 0.00 27 81 1 25 3.85 26 82 1 23 4.17 24 83 0 22 0.00 22 84 0 18 0.00 18 85 1 17 5.56 18 86 0 17 0.00 17 87 0 18 0.00 18 88 0 22 0.00 22 89 0 19 0.00 19 90 1 15 6.25 16 91 0 15 0.00 15 92 0 18 0.00 18 93 0 8 0.00 8 94 0 20 0.00 20 95 0 16 0.00 16 96 0 13 0.00 13 97 0 16 0.00 16 98 0 9 0.00 9 99 0 7 0.00 7 100 0 7 0.00 7 101 0 23 0.00 23 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 2 8 20.00 10 2 2 7 22.22 9 3 1 15 6.25 16 4 1 17 5.56 18 5 0 11 0.00 11 6 0 13 0.00 13 7 0 9 0.00 9 8 0 14 0.00 14 9 0 10 0.00 10 10 0 13 0.00 13 11 0 8 0.00 8 12 0 6 0.00 6 13 0 7 0.00 7 14 0 7 0.00 7 15 0 12 0.00 12 16 0 8 0.00 8 17 0 13 0.00 13 18 0 8 0.00 8 19 0 12 0.00 12 20 0 11 0.00 11 21 0 9 0.00 9 22 0 9 0.00 9 23 0 8 0.00 8 24 0 6 0.00 6 25 0 5 0.00 5 26 0 13 0.00 13 27 0 8 0.00 8 28 0 2 0.00 2 29 0 3 0.00 3 30 0 5 0.00 5 31 0 12 0.00 12 32 0 6 0.00 6 33 0 6 0.00 6 34 0 8 0.00 8 35 0 6 0.00 6 36 0 7 0.00 7 37 0 10 0.00 10 38 1 4 20.00 5 39 0 6 0.00 6 40 0 1 0.00 1 41 0 3 0.00 3 42 0 8 0.00 8 43 0 7 0.00 7 44 0 5 0.00 5 45 0 0 0 46 0 2 0.00 2 47 0 8 0.00 8 48 0 4 0.00 4 49 0 7 0.00 7 50 0 4 0.00 4 51 0 3 0.00 3 52 0 4 0.00 4 53 0 3 0.00 3 54 0 5 0.00 5 55 0 2 0.00 2 56 0 5 0.00 5 57 0 4 0.00 4 58 0 10 0.00 10 59 0 8 0.00 8 60 0 0 0 61 0 2 0.00 2 62 0 0 0 63 0 8 0.00 8 64 0 3 0.00 3 65 0 10 0.00 10 66 0 5 0.00 5 67 0 6 0.00 6 68 0 3 0.00 3 69 0 3 0.00 3 70 0 1 0.00 1 71 0 1 0.00 1 72 0 4 0.00 4 73 0 1 0.00 1 74 0 3 0.00 3 75 0 3 0.00 3 76 0 3 0.00 3 77 0 2 0.00 2 78 0 2 0.00 2 79 0 4 0.00 4 80 0 4 0.00 4 81 0 2 0.00 2 82 0 5 0.00 5 83 0 1 0.00 1 84 0 1 0.00 1 85 0 0 0 86 0 2 0.00 2 87 0 0 0 88 0 2 0.00 2 89 0 2 0.00 2 90 0 2 0.00 2 91 0 3 0.00 3 92 0 2 0.00 2 93 0 1 0.00 1 94 0 1 0.00 1 95 0 3 0.00 3 96 0 1 0.00 1 97 0 2 0.00 2 98 0 2 0.00 2 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 10 9.09 11 2 2 11 15.38 13 3 0 8 0.00 8 4 2 9 18.18 11 5 0 13 0.00 13 6 0 16 0.00 16 7 0 9 0.00 9 8 0 9 0.00 9 9 0 16 0.00 16 10 0 10 0.00 10 11 0 10 0.00 10 12 0 7 0.00 7 13 0 7 0.00 7 14 0 10 0.00 10 15 0 9 0.00 9 16 0 4 0.00 4 17 0 8 0.00 8 18 1 11 8.33 12 19 0 10 0.00 10 20 0 8 0.00 8 21 0 5 0.00 5 22 0 9 0.00 9 23 0 4 0.00 4 24 0 4 0.00 4 25 0 7 0.00 7 26 0 7 0.00 7 27 0 12 0.00 12 28 0 10 0.00 10 29 1 9 10.00 10 30 0 7 0.00 7 31 0 6 0.00 6 32 0 10 0.00 10 33 0 8 0.00 8 34 0 8 0.00 8 35 1 5 16.67 6 36 0 8 0.00 8 37 0 7 0.00 7 38 1 6 14.29 7 39 0 5 0.00 5 40 0 2 0.00 2 41 0 6 0.00 6 42 0 5 0.00 5 43 0 1 0.00 1 44 0 8 0.00 8 45 0 4 0.00 4 46 0 6 0.00 6 47 0 7 0.00 7 48 0 6 0.00 6 49 0 5 0.00 5 50 0 2 0.00 2 51 0 8 0.00 8 52 0 2 0.00 2 53 0 6 0.00 6 54 0 4 0.00 4 55 0 3 0.00 3 56 0 1 0.00 1 57 0 5 0.00 5 58 0 1 0.00 1 59 0 7 0.00 7 60 0 7 0.00 7 61 0 2 0.00 2 62 0 2 0.00 2 63 0 1 0.00 1 64 0 3 0.00 3 65 0 2 0.00 2 66 0 2 0.00 2 67 0 4 0.00 4 68 1 3 25.00 4 69 1 5 16.67 6 70 0 6 0.00 6 71 0 1 0.00 1 72 0 1 0.00 1 73 0 5 0.00 5 74 0 5 0.00 5 75 0 5 0.00 5 76 0 3 0.00 3 77 0 1 0.00 1 78 0 2 0.00 2 79 0 2 0.00 2 80 0 2 0.00 2 81 0 1 0.00 1 82 0 2 0.00 2 83 0 3 0.00 3 84 0 4 0.00 4 85 0 5 0.00 5 86 0 2 0.00 2 87 0 4 0.00 4 88 0 2 0.00 2 89 0 0 0 90 0 0 0 91 0 3 0.00 3 92 0 2 0.00 2 93 0 2 0.00 2 94 0 2 0.00 2 95 0 0 0 96 0 2 0.00 2 97 0 2 0.00 2 98 0 2 0.00 2 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 0 8 0.00 8 2 1 7 12.50 8 3 1 2 33.33 3 4 0 3 0.00 3 5 0 7 0.00 7 6 0 10 0.00 10 7 0 13 0.00 13 8 0 15 0.00 15 9 0 12 0.00 12 10 0 17 0.00 17 11 0 20 0.00 20 12 0 10 0.00 10 13 0 17 0.00 17 14 0 20 0.00 20 15 0 21 0.00 21 16 0 14 0.00 14 17 0 16 0.00 16 18 0 11 0.00 11 19 0 14 0.00 14 20 0 10 0.00 10 21 0 10 0.00 10 22 0 12 0.00 12 23 0 9 0.00 9 24 0 11 0.00 11 25 0 8 0.00 8 26 0 10 0.00 10 27 0 16 0.00 16 28 0 15 0.00 15 29 0 13 0.00 13 30 0 9 0.00 9 31 0 10 0.00 10 32 0 9 0.00 9 33 0 12 0.00 12 34 0 11 0.00 11 35 0 10 0.00 10 36 0 13 0.00 13 37 0 7 0.00 7 38 0 9 0.00 9 39 0 12 0.00 12 40 0 11 0.00 11 41 0 4 0.00 4 42 0 6 0.00 6 43 0 10 0.00 10 44 0 9 0.00 9 45 0 9 0.00 9 46 0 9 0.00 9 47 0 7 0.00 7 48 0 10 0.00 10 49 0 10 0.00 10 50 0 8 0.00 8 51 0 8 0.00 8 52 0 8 0.00 8 53 0 12 0.00 12 54 0 9 0.00 9 55 1 14 6.67 15 56 0 8 0.00 8 57 0 14 0.00 14 58 0 4 0.00 4 59 0 10 0.00 10 60 0 7 0.00 7 61 0 8 0.00 8 62 0 4 0.00 4 63 1 6 14.29 7 64 0 7 0.00 7 65 0 8 0.00 8 66 0 4 0.00 4 67 0 6 0.00 6 68 0 8 0.00 8 69 0 8 0.00 8 70 0 8 0.00 8 71 1 8 11.11 9 72 0 3 0.00 3 73 0 3 0.00 3 74 0 5 0.00 5 75 0 2 0.00 2 76 0 6 0.00 6 77 0 6 0.00 6 78 0 3 0.00 3 79 0 7 0.00 7 80 0 3 0.00 3 81 0 4 0.00 4 82 0 5 0.00 5 83 0 7 0.00 7 84 0 7 0.00 7 85 0 6 0.00 6 86 0 5 0.00 5 87 0 3 0.00 3 88 0 11 0.00 11 89 0 3 0.00 3 90 0 4 0.00 4 91 0 6 0.00 6 92 0 5 0.00 5 93 0 5 0.00 5 94 0 3 0.00 3 95 0 4 0.00 4 96 0 3 0.00 3 97 0 5 0.00 5 98 0 5 0.00 5