EPI-206_S27_L004_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 473 lines in total Total number of methylation call strings processed: 946 Final Cytosine Methylation Report ================================= Total number of C's analysed: 10280 Total methylated C's in CpG context: 37 Total methylated C's in CHG context: 112 Total methylated C's in CHH context: 54 Total C to T conversions in CpG context: 2932 Total C to T conversions in CHG context: 2805 Total C to T conversions in CHH context: 4340 C methylated in CpG context: 1.2% C methylated in CHG context: 3.8% C methylated in CHH context: 1.2%