EPI-205_S26_L004_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 467 lines in total Total number of methylation call strings processed: 934 Final Cytosine Methylation Report ================================= Total number of C's analysed: 10791 Total methylated C's in CpG context: 46 Total methylated C's in CHG context: 119 Total methylated C's in CHH context: 49 Total C to T conversions in CpG context: 3064 Total C to T conversions in CHG context: 2993 Total C to T conversions in CHH context: 4520 C methylated in CpG context: 1.5% C methylated in CHG context: 3.8% C methylated in CHH context: 1.1%