CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 3 54 5.26 57 2 1 67 1.47 68 3 1 64 1.54 65 4 0 28 0.00 28 5 0 33 0.00 33 6 1 29 3.33 30 7 0 31 0.00 31 8 0 19 0.00 19 9 0 19 0.00 19 10 0 36 0.00 36 11 1 28 3.45 29 12 0 25 0.00 25 13 0 26 0.00 26 14 0 26 0.00 26 15 0 27 0.00 27 16 1 21 4.55 22 17 0 34 0.00 34 18 0 27 0.00 27 19 1 32 3.03 33 20 0 25 0.00 25 21 0 30 0.00 30 22 0 32 0.00 32 23 0 30 0.00 30 24 0 31 0.00 31 25 0 30 0.00 30 26 1 22 4.35 23 27 0 20 0.00 20 28 0 31 0.00 31 29 2 22 8.33 24 30 0 32 0.00 32 31 1 33 2.94 34 32 1 27 3.57 28 33 0 29 0.00 29 34 0 29 0.00 29 35 0 37 0.00 37 36 0 26 0.00 26 37 1 23 4.17 24 38 0 27 0.00 27 39 0 36 0.00 36 40 0 30 0.00 30 41 0 27 0.00 27 42 0 30 0.00 30 43 0 14 0.00 14 44 0 29 0.00 29 45 1 28 3.45 29 46 1 30 3.23 31 47 0 16 0.00 16 48 0 29 0.00 29 49 0 32 0.00 32 50 1 17 5.56 18 51 0 32 0.00 32 52 1 18 5.26 19 53 0 22 0.00 22 54 0 20 0.00 20 55 0 34 0.00 34 56 0 31 0.00 31 57 1 36 2.70 37 58 0 23 0.00 23 59 1 32 3.03 33 60 1 23 4.17 24 61 1 24 4.00 25 62 0 19 0.00 19 63 1 21 4.55 22 64 1 17 5.56 18 65 0 26 0.00 26 66 0 15 0.00 15 67 0 19 0.00 19 68 0 19 0.00 19 69 0 22 0.00 22 70 0 18 0.00 18 71 0 22 0.00 22 72 0 14 0.00 14 73 0 19 0.00 19 74 1 30 3.23 31 75 0 11 0.00 11 76 0 18 0.00 18 77 1 12 7.69 13 78 0 20 0.00 20 79 0 16 0.00 16 80 0 11 0.00 11 81 1 27 3.57 28 82 0 16 0.00 16 83 0 25 0.00 25 84 0 13 0.00 13 85 0 13 0.00 13 86 0 13 0.00 13 87 0 12 0.00 12 88 1 12 7.69 13 89 0 8 0.00 8 90 0 13 0.00 13 91 0 21 0.00 21 92 0 16 0.00 16 93 1 19 5.00 20 94 0 13 0.00 13 95 0 14 0.00 14 96 1 10 9.09 11 97 0 10 0.00 10 98 0 17 0.00 17 99 0 12 0.00 12 100 0 17 0.00 17 101 0 14 0.00 14 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 32 15 68.09 47 2 18 17 51.43 35 3 5 18 21.74 23 4 4 25 13.79 29 5 3 27 10.00 30 6 3 12 20.00 15 7 1 35 2.78 36 8 1 29 3.33 30 9 0 26 0.00 26 10 1 34 2.86 35 11 3 33 8.33 36 12 1 28 3.45 29 13 0 24 0.00 24 14 0 40 0.00 40 15 0 17 0.00 17 16 0 37 0.00 37 17 0 28 0.00 28 18 0 26 0.00 26 19 0 20 0.00 20 20 0 35 0.00 35 21 0 35 0.00 35 22 0 25 0.00 25 23 0 33 0.00 33 24 0 31 0.00 31 25 0 35 0.00 35 26 0 25 0.00 25 27 0 40 0.00 40 28 0 45 0.00 45 29 0 31 0.00 31 30 1 21 4.55 22 31 1 27 3.57 28 32 1 29 3.33 30 33 0 26 0.00 26 34 3 40 6.98 43 35 1 29 3.33 30 36 0 29 0.00 29 37 0 31 0.00 31 38 0 28 0.00 28 39 0 31 0.00 31 40 0 30 0.00 30 41 1 36 2.70 37 42 0 31 0.00 31 43 1 23 4.17 24 44 1 26 3.70 27 45 0 22 0.00 22 46 0 26 0.00 26 47 0 31 0.00 31 48 0 22 0.00 22 49 0 26 0.00 26 50 0 25 0.00 25 51 0 16 0.00 16 52 0 29 0.00 29 53 0 28 0.00 28 54 1 30 3.23 31 55 0 31 0.00 31 56 1 24 4.00 25 57 0 21 0.00 21 58 0 19 0.00 19 59 1 13 7.14 14 60 0 27 0.00 27 61 0 23 0.00 23 62 1 27 3.57 28 63 1 24 4.00 25 64 0 24 0.00 24 65 1 12 7.69 13 66 0 20 0.00 20 67 0 33 0.00 33 68 0 16 0.00 16 69 1 15 6.25 16 70 0 28 0.00 28 71 1 13 7.14 14 72 0 28 0.00 28 73 0 22 0.00 22 74 0 13 0.00 13 75 0 15 0.00 15 76 1 21 4.55 22 77 1 13 7.14 14 78 0 19 0.00 19 79 0 17 0.00 17 80 0 18 0.00 18 81 0 15 0.00 15 82 0 18 0.00 18 83 0 13 0.00 13 84 1 16 5.88 17 85 0 14 0.00 14 86 1 14 6.67 15 87 0 23 0.00 23 88 1 12 7.69 13 89 0 9 0.00 9 90 1 12 7.69 13 91 1 6 14.29 7 92 2 14 12.50 16 93 0 14 0.00 14 94 0 14 0.00 14 95 0 11 0.00 11 96 0 7 0.00 7 97 0 14 0.00 14 98 0 8 0.00 8 99 1 4 20.00 5 100 0 6 0.00 6 101 1 11 8.33 12 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 11 8 57.89 19 2 7 14 33.33 21 3 1 21 4.55 22 4 2 30 6.25 32 5 2 31 6.06 33 6 2 42 4.55 44 7 1 44 2.22 45 8 1 45 2.17 46 9 0 53 0.00 53 10 0 51 0.00 51 11 0 41 0.00 41 12 0 51 0.00 51 13 1 38 2.56 39 14 0 45 0.00 45 15 0 59 0.00 59 16 0 60 0.00 60 17 0 56 0.00 56 18 0 51 0.00 51 19 0 53 0.00 53 20 1 37 2.63 38 21 0 48 0.00 48 22 0 41 0.00 41 23 0 37 0.00 37 24 0 51 0.00 51 25 1 49 2.00 50 26 0 54 0.00 54 27 0 44 0.00 44 28 0 41 0.00 41 29 1 37 2.63 38 30 1 36 2.70 37 31 0 51 0.00 51 32 0 63 0.00 63 33 1 52 1.89 53 34 0 35 0.00 35 35 0 50 0.00 50 36 0 34 0.00 34 37 0 42 0.00 42 38 0 43 0.00 43 39 0 25 0.00 25 40 1 23 4.17 24 41 0 41 0.00 41 42 0 40 0.00 40 43 0 35 0.00 35 44 0 39 0.00 39 45 1 44 2.22 45 46 0 58 0.00 58 47 0 53 0.00 53 48 0 34 0.00 34 49 0 35 0.00 35 50 0 46 0.00 46 51 0 44 0.00 44 52 0 45 0.00 45 53 0 48 0.00 48 54 0 38 0.00 38 55 0 31 0.00 31 56 0 32 0.00 32 57 0 41 0.00 41 58 0 29 0.00 29 59 0 33 0.00 33 60 0 35 0.00 35 61 1 37 2.63 38 62 0 32 0.00 32 63 0 50 0.00 50 64 1 27 3.57 28 65 0 37 0.00 37 66 0 32 0.00 32 67 0 41 0.00 41 68 0 26 0.00 26 69 0 30 0.00 30 70 0 27 0.00 27 71 0 40 0.00 40 72 0 27 0.00 27 73 0 22 0.00 22 74 0 29 0.00 29 75 0 35 0.00 35 76 0 27 0.00 27 77 0 34 0.00 34 78 0 25 0.00 25 79 0 32 0.00 32 80 1 27 3.57 28 81 0 23 0.00 23 82 0 15 0.00 15 83 0 28 0.00 28 84 0 16 0.00 16 85 1 21 4.55 22 86 0 24 0.00 24 87 0 16 0.00 16 88 0 24 0.00 24 89 0 27 0.00 27 90 0 28 0.00 28 91 0 18 0.00 18 92 0 15 0.00 15 93 0 22 0.00 22 94 0 11 0.00 11 95 1 15 6.25 16 96 0 16 0.00 16 97 0 15 0.00 15 98 0 18 0.00 18 99 0 15 0.00 15 100 0 15 0.00 15 101 0 20 0.00 20 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3 9 25.00 12 2 2 10 16.67 12 3 1 20 4.76 21 4 4 15 21.05 19 5 0 20 0.00 20 6 0 10 0.00 10 7 0 4 0.00 4 8 0 12 0.00 12 9 0 10 0.00 10 10 0 13 0.00 13 11 0 10 0.00 10 12 0 9 0.00 9 13 0 9 0.00 9 14 0 11 0.00 11 15 0 8 0.00 8 16 0 10 0.00 10 17 0 6 0.00 6 18 1 14 6.67 15 19 1 5 16.67 6 20 0 14 0.00 14 21 0 13 0.00 13 22 0 5 0.00 5 23 0 9 0.00 9 24 1 10 9.09 11 25 0 11 0.00 11 26 0 7 0.00 7 27 0 7 0.00 7 28 0 9 0.00 9 29 0 4 0.00 4 30 0 4 0.00 4 31 0 14 0.00 14 32 0 12 0.00 12 33 0 7 0.00 7 34 0 5 0.00 5 35 0 9 0.00 9 36 0 6 0.00 6 37 0 7 0.00 7 38 0 7 0.00 7 39 0 3 0.00 3 40 0 3 0.00 3 41 0 4 0.00 4 42 0 7 0.00 7 43 0 8 0.00 8 44 0 6 0.00 6 45 0 6 0.00 6 46 0 4 0.00 4 47 0 13 0.00 13 48 1 6 14.29 7 49 0 6 0.00 6 50 0 4 0.00 4 51 0 7 0.00 7 52 0 5 0.00 5 53 0 5 0.00 5 54 0 3 0.00 3 55 0 4 0.00 4 56 0 2 0.00 2 57 0 2 0.00 2 58 0 3 0.00 3 59 0 3 0.00 3 60 0 11 0.00 11 61 0 3 0.00 3 62 0 3 0.00 3 63 0 9 0.00 9 64 0 4 0.00 4 65 0 2 0.00 2 66 0 4 0.00 4 67 0 6 0.00 6 68 0 2 0.00 2 69 0 4 0.00 4 70 0 4 0.00 4 71 0 2 0.00 2 72 0 3 0.00 3 73 0 4 0.00 4 74 0 8 0.00 8 75 0 7 0.00 7 76 0 3 0.00 3 77 0 3 0.00 3 78 0 3 0.00 3 79 0 6 0.00 6 80 0 5 0.00 5 81 0 7 0.00 7 82 0 2 0.00 2 83 0 5 0.00 5 84 0 2 0.00 2 85 0 4 0.00 4 86 0 5 0.00 5 87 0 3 0.00 3 88 0 3 0.00 3 89 0 1 0.00 1 90 0 2 0.00 2 91 0 2 0.00 2 92 0 6 0.00 6 93 1 3 25.00 4 94 0 1 0.00 1 95 0 3 0.00 3 96 0 4 0.00 4 97 0 4 0.00 4 98 0 3 0.00 3 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 7 12.50 8 2 2 10 16.67 12 3 4 11 26.67 15 4 2 13 13.33 15 5 0 10 0.00 10 6 0 19 0.00 19 7 1 14 6.67 15 8 1 12 7.69 13 9 0 9 0.00 9 10 0 15 0.00 15 11 0 12 0.00 12 12 0 9 0.00 9 13 1 15 6.25 16 14 0 12 0.00 12 15 0 11 0.00 11 16 0 2 0.00 2 17 1 13 7.14 14 18 0 10 0.00 10 19 0 7 0.00 7 20 0 9 0.00 9 21 0 13 0.00 13 22 0 16 0.00 16 23 0 9 0.00 9 24 0 9 0.00 9 25 0 8 0.00 8 26 1 15 6.25 16 27 0 3 0.00 3 28 0 9 0.00 9 29 0 13 0.00 13 30 1 10 9.09 11 31 0 9 0.00 9 32 0 6 0.00 6 33 0 7 0.00 7 34 0 8 0.00 8 35 0 2 0.00 2 36 0 10 0.00 10 37 0 7 0.00 7 38 0 7 0.00 7 39 0 8 0.00 8 40 0 6 0.00 6 41 0 7 0.00 7 42 0 4 0.00 4 43 0 8 0.00 8 44 1 4 20.00 5 45 0 6 0.00 6 46 0 8 0.00 8 47 0 8 0.00 8 48 0 12 0.00 12 49 0 8 0.00 8 50 0 4 0.00 4 51 0 4 0.00 4 52 0 8 0.00 8 53 0 7 0.00 7 54 0 9 0.00 9 55 0 3 0.00 3 56 0 6 0.00 6 57 0 5 0.00 5 58 0 3 0.00 3 59 0 6 0.00 6 60 1 8 11.11 9 61 0 6 0.00 6 62 0 4 0.00 4 63 0 7 0.00 7 64 0 5 0.00 5 65 0 6 0.00 6 66 0 4 0.00 4 67 0 5 0.00 5 68 0 4 0.00 4 69 0 3 0.00 3 70 0 6 0.00 6 71 0 9 0.00 9 72 0 6 0.00 6 73 0 6 0.00 6 74 0 5 0.00 5 75 0 5 0.00 5 76 0 6 0.00 6 77 1 3 25.00 4 78 0 5 0.00 5 79 0 2 0.00 2 80 0 7 0.00 7 81 0 1 0.00 1 82 0 2 0.00 2 83 0 1 0.00 1 84 0 6 0.00 6 85 0 6 0.00 6 86 0 5 0.00 5 87 0 3 0.00 3 88 0 3 0.00 3 89 0 8 0.00 8 90 0 3 0.00 3 91 0 1 0.00 1 92 0 0 0 93 0 2 0.00 2 94 0 2 0.00 2 95 0 4 0.00 4 96 0 3 0.00 3 97 0 2 0.00 2 98 0 5 0.00 5 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 8 11.11 9 2 1 7 12.50 8 3 1 6 14.29 7 4 0 2 0.00 2 5 0 9 0.00 9 6 0 13 0.00 13 7 0 11 0.00 11 8 0 18 0.00 18 9 0 27 0.00 27 10 0 18 0.00 18 11 0 23 0.00 23 12 0 23 0.00 23 13 1 23 4.17 24 14 0 20 0.00 20 15 1 17 5.56 18 16 0 15 0.00 15 17 0 11 0.00 11 18 0 15 0.00 15 19 0 13 0.00 13 20 0 4 0.00 4 21 0 14 0.00 14 22 0 15 0.00 15 23 0 9 0.00 9 24 1 14 6.67 15 25 0 6 0.00 6 26 0 10 0.00 10 27 0 13 0.00 13 28 0 8 0.00 8 29 0 13 0.00 13 30 0 12 0.00 12 31 0 15 0.00 15 32 0 11 0.00 11 33 0 12 0.00 12 34 0 18 0.00 18 35 0 24 0.00 24 36 0 12 0.00 12 37 0 11 0.00 11 38 0 12 0.00 12 39 0 8 0.00 8 40 1 15 6.25 16 41 0 9 0.00 9 42 0 7 0.00 7 43 0 10 0.00 10 44 0 18 0.00 18 45 0 9 0.00 9 46 0 5 0.00 5 47 0 12 0.00 12 48 0 8 0.00 8 49 0 15 0.00 15 50 0 14 0.00 14 51 0 13 0.00 13 52 0 12 0.00 12 53 0 16 0.00 16 54 0 7 0.00 7 55 0 14 0.00 14 56 0 14 0.00 14 57 1 14 6.67 15 58 0 6 0.00 6 59 0 10 0.00 10 60 0 12 0.00 12 61 0 7 0.00 7 62 0 6 0.00 6 63 0 9 0.00 9 64 0 10 0.00 10 65 0 6 0.00 6 66 0 12 0.00 12 67 0 5 0.00 5 68 0 11 0.00 11 69 0 6 0.00 6 70 0 8 0.00 8 71 0 9 0.00 9 72 0 9 0.00 9 73 0 6 0.00 6 74 0 7 0.00 7 75 0 6 0.00 6 76 0 5 0.00 5 77 0 8 0.00 8 78 1 7 12.50 8 79 0 7 0.00 7 80 0 7 0.00 7 81 0 4 0.00 4 82 0 6 0.00 6 83 0 5 0.00 5 84 0 3 0.00 3 85 0 3 0.00 3 86 0 7 0.00 7 87 0 8 0.00 8 88 0 3 0.00 3 89 0 3 0.00 3 90 0 6 0.00 6 91 0 6 0.00 6 92 0 7 0.00 7 93 0 5 0.00 5 94 0 6 0.00 6 95 0 4 0.00 4 96 0 3 0.00 3 97 0 1 0.00 1 98 0 3 0.00 3