EPI-199_S24_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 419 lines in total Total number of methylation call strings processed: 838 Final Cytosine Methylation Report ================================= Total number of C's analysed: 9683 Total methylated C's in CpG context: 35 Total methylated C's in CHG context: 106 Total methylated C's in CHH context: 44 Total C to T conversions in CpG context: 2658 Total C to T conversions in CHG context: 2560 Total C to T conversions in CHH context: 4280 C methylated in CpG context: 1.3% C methylated in CHG context: 4.0% C methylated in CHH context: 1.0%