EPI-185_S19_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 464 lines in total Total number of methylation call strings processed: 928 Final Cytosine Methylation Report ================================= Total number of C's analysed: 11528 Total methylated C's in CpG context: 53 Total methylated C's in CHG context: 122 Total methylated C's in CHH context: 44 Total C to T conversions in CpG context: 3227 Total C to T conversions in CHG context: 2992 Total C to T conversions in CHH context: 5090 C methylated in CpG context: 1.6% C methylated in CHG context: 3.9% C methylated in CHH context: 0.9%