CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1 44 2.22 45 2 1 63 1.56 64 3 2 54 3.57 56 4 2 31 6.06 33 5 0 30 0.00 30 6 0 17 0.00 17 7 0 20 0.00 20 8 1 16 5.88 17 9 0 30 0.00 30 10 0 33 0.00 33 11 0 27 0.00 27 12 0 31 0.00 31 13 1 23 4.17 24 14 0 33 0.00 33 15 0 23 0.00 23 16 2 30 6.25 32 17 0 30 0.00 30 18 0 19 0.00 19 19 0 24 0.00 24 20 0 23 0.00 23 21 0 37 0.00 37 22 0 18 0.00 18 23 0 18 0.00 18 24 2 19 9.52 21 25 0 27 0.00 27 26 0 22 0.00 22 27 0 32 0.00 32 28 1 28 3.45 29 29 0 23 0.00 23 30 0 25 0.00 25 31 0 27 0.00 27 32 0 32 0.00 32 33 0 23 0.00 23 34 0 26 0.00 26 35 1 31 3.12 32 36 0 24 0.00 24 37 2 22 8.33 24 38 0 23 0.00 23 39 0 23 0.00 23 40 0 26 0.00 26 41 0 29 0.00 29 42 0 28 0.00 28 43 0 29 0.00 29 44 0 19 0.00 19 45 0 21 0.00 21 46 0 26 0.00 26 47 0 36 0.00 36 48 0 12 0.00 12 49 1 27 3.57 28 50 1 25 3.85 26 51 0 25 0.00 25 52 0 24 0.00 24 53 0 26 0.00 26 54 0 24 0.00 24 55 0 27 0.00 27 56 0 23 0.00 23 57 0 27 0.00 27 58 0 29 0.00 29 59 0 27 0.00 27 60 0 23 0.00 23 61 0 28 0.00 28 62 0 19 0.00 19 63 0 19 0.00 19 64 0 17 0.00 17 65 0 19 0.00 19 66 0 23 0.00 23 67 1 16 5.88 17 68 0 15 0.00 15 69 0 22 0.00 22 70 1 14 6.67 15 71 0 23 0.00 23 72 0 22 0.00 22 73 1 17 5.56 18 74 0 25 0.00 25 75 0 15 0.00 15 76 0 25 0.00 25 77 0 22 0.00 22 78 0 16 0.00 16 79 1 20 4.76 21 80 0 15 0.00 15 81 0 28 0.00 28 82 0 22 0.00 22 83 0 15 0.00 15 84 0 20 0.00 20 85 0 19 0.00 19 86 0 20 0.00 20 87 0 16 0.00 16 88 0 17 0.00 17 89 0 13 0.00 13 90 0 17 0.00 17 91 0 23 0.00 23 92 0 9 0.00 9 93 0 23 0.00 23 94 0 16 0.00 16 95 1 22 4.35 23 96 0 22 0.00 22 97 0 19 0.00 19 98 1 15 6.25 16 99 0 20 0.00 20 100 0 11 0.00 11 101 0 13 0.00 13 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 26 14 65.00 40 2 15 14 51.72 29 3 10 18 35.71 28 4 4 18 18.18 22 5 3 18 14.29 21 6 3 22 12.00 25 7 2 38 5.00 40 8 1 18 5.26 19 9 0 18 0.00 18 10 0 24 0.00 24 11 2 30 6.25 32 12 1 19 5.00 20 13 2 24 7.69 26 14 0 35 0.00 35 15 1 28 3.45 29 16 0 30 0.00 30 17 0 20 0.00 20 18 0 32 0.00 32 19 0 23 0.00 23 20 0 28 0.00 28 21 0 18 0.00 18 22 3 23 11.54 26 23 0 27 0.00 27 24 1 20 4.76 21 25 0 24 0.00 24 26 0 34 0.00 34 27 0 35 0.00 35 28 0 25 0.00 25 29 0 32 0.00 32 30 3 39 7.14 42 31 1 29 3.33 30 32 1 20 4.76 21 33 0 20 0.00 20 34 0 27 0.00 27 35 1 25 3.85 26 36 0 27 0.00 27 37 1 29 3.33 30 38 1 26 3.70 27 39 1 27 3.57 28 40 0 30 0.00 30 41 0 25 0.00 25 42 0 36 0.00 36 43 0 16 0.00 16 44 0 21 0.00 21 45 0 22 0.00 22 46 0 31 0.00 31 47 1 21 4.55 22 48 0 28 0.00 28 49 0 29 0.00 29 50 0 26 0.00 26 51 0 16 0.00 16 52 0 22 0.00 22 53 0 31 0.00 31 54 1 24 4.00 25 55 0 37 0.00 37 56 2 27 6.90 29 57 0 34 0.00 34 58 0 17 0.00 17 59 0 35 0.00 35 60 0 23 0.00 23 61 0 22 0.00 22 62 0 27 0.00 27 63 0 27 0.00 27 64 0 26 0.00 26 65 0 33 0.00 33 66 0 20 0.00 20 67 1 29 3.33 30 68 0 23 0.00 23 69 0 31 0.00 31 70 0 22 0.00 22 71 0 18 0.00 18 72 0 16 0.00 16 73 0 24 0.00 24 74 0 26 0.00 26 75 0 22 0.00 22 76 0 21 0.00 21 77 1 15 6.25 16 78 0 19 0.00 19 79 0 22 0.00 22 80 1 18 5.26 19 81 0 15 0.00 15 82 0 17 0.00 17 83 1 21 4.55 22 84 0 17 0.00 17 85 0 13 0.00 13 86 0 15 0.00 15 87 0 15 0.00 15 88 1 20 4.76 21 89 0 10 0.00 10 90 1 12 7.69 13 91 1 18 5.26 19 92 1 16 5.88 17 93 0 11 0.00 11 94 0 16 0.00 16 95 1 15 6.25 16 96 0 13 0.00 13 97 0 12 0.00 12 98 1 14 6.67 15 99 0 10 0.00 10 100 0 5 0.00 5 101 0 14 0.00 14 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 9 6 60.00 15 2 4 10 28.57 14 3 3 18 14.29 21 4 3 25 10.71 28 5 1 30 3.23 31 6 0 41 0.00 41 7 2 37 5.13 39 8 2 44 4.35 46 9 1 30 3.23 31 10 0 33 0.00 33 11 0 36 0.00 36 12 0 40 0.00 40 13 0 35 0.00 35 14 0 43 0.00 43 15 0 46 0.00 46 16 0 49 0.00 49 17 1 39 2.50 40 18 0 47 0.00 47 19 0 44 0.00 44 20 0 42 0.00 42 21 0 45 0.00 45 22 1 42 2.33 43 23 1 37 2.63 38 24 0 39 0.00 39 25 0 42 0.00 42 26 1 48 2.04 49 27 0 45 0.00 45 28 1 43 2.27 44 29 0 56 0.00 56 30 0 40 0.00 40 31 0 37 0.00 37 32 0 48 0.00 48 33 0 49 0.00 49 34 2 46 4.17 48 35 0 40 0.00 40 36 0 43 0.00 43 37 0 40 0.00 40 38 0 38 0.00 38 39 0 47 0.00 47 40 0 39 0.00 39 41 0 43 0.00 43 42 0 38 0.00 38 43 0 51 0.00 51 44 0 53 0.00 53 45 0 61 0.00 61 46 0 48 0.00 48 47 0 44 0.00 44 48 1 39 2.50 40 49 0 46 0.00 46 50 0 39 0.00 39 51 0 43 0.00 43 52 0 43 0.00 43 53 1 37 2.63 38 54 0 45 0.00 45 55 0 56 0.00 56 56 1 37 2.63 38 57 0 38 0.00 38 58 0 36 0.00 36 59 0 32 0.00 32 60 0 30 0.00 30 61 0 43 0.00 43 62 1 35 2.78 36 63 0 40 0.00 40 64 0 28 0.00 28 65 0 38 0.00 38 66 0 39 0.00 39 67 0 30 0.00 30 68 1 37 2.63 38 69 0 33 0.00 33 70 0 26 0.00 26 71 0 33 0.00 33 72 0 41 0.00 41 73 0 36 0.00 36 74 1 32 3.03 33 75 0 31 0.00 31 76 0 27 0.00 27 77 0 33 0.00 33 78 0 40 0.00 40 79 0 35 0.00 35 80 0 35 0.00 35 81 0 20 0.00 20 82 0 28 0.00 28 83 0 33 0.00 33 84 0 22 0.00 22 85 0 23 0.00 23 86 0 15 0.00 15 87 1 27 3.57 28 88 0 23 0.00 23 89 0 24 0.00 24 90 0 35 0.00 35 91 1 29 3.33 30 92 0 25 0.00 25 93 0 22 0.00 22 94 1 20 4.76 21 95 0 23 0.00 23 96 1 20 4.76 21 97 0 26 0.00 26 98 0 22 0.00 22 99 0 11 0.00 11 100 0 13 0.00 13 101 0 26 0.00 26 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3 8 27.27 11 2 0 12 0.00 12 3 3 17 15.00 20 4 3 13 18.75 16 5 0 20 0.00 20 6 0 15 0.00 15 7 0 12 0.00 12 8 0 12 0.00 12 9 0 16 0.00 16 10 0 13 0.00 13 11 0 13 0.00 13 12 0 10 0.00 10 13 0 19 0.00 19 14 0 11 0.00 11 15 0 20 0.00 20 16 0 9 0.00 9 17 0 12 0.00 12 18 0 22 0.00 22 19 0 13 0.00 13 20 0 13 0.00 13 21 0 11 0.00 11 22 0 9 0.00 9 23 0 8 0.00 8 24 0 11 0.00 11 25 0 14 0.00 14 26 0 14 0.00 14 27 0 9 0.00 9 28 0 9 0.00 9 29 1 9 10.00 10 30 0 8 0.00 8 31 0 10 0.00 10 32 1 11 8.33 12 33 0 11 0.00 11 34 0 10 0.00 10 35 0 10 0.00 10 36 0 6 0.00 6 37 0 7 0.00 7 38 1 10 9.09 11 39 0 7 0.00 7 40 0 7 0.00 7 41 0 6 0.00 6 42 0 9 0.00 9 43 0 5 0.00 5 44 1 2 33.33 3 45 0 4 0.00 4 46 0 8 0.00 8 47 0 3 0.00 3 48 0 9 0.00 9 49 0 6 0.00 6 50 0 6 0.00 6 51 0 5 0.00 5 52 0 10 0.00 10 53 0 1 0.00 1 54 0 8 0.00 8 55 0 4 0.00 4 56 0 3 0.00 3 57 0 2 0.00 2 58 0 6 0.00 6 59 0 6 0.00 6 60 0 9 0.00 9 61 0 3 0.00 3 62 0 0 0 63 0 10 0.00 10 64 0 10 0.00 10 65 0 6 0.00 6 66 0 9 0.00 9 67 0 4 0.00 4 68 0 4 0.00 4 69 0 6 0.00 6 70 0 8 0.00 8 71 0 4 0.00 4 72 0 3 0.00 3 73 0 1 0.00 1 74 0 2 0.00 2 75 0 3 0.00 3 76 0 4 0.00 4 77 0 4 0.00 4 78 0 2 0.00 2 79 0 2 0.00 2 80 0 8 0.00 8 81 0 4 0.00 4 82 0 5 0.00 5 83 0 4 0.00 4 84 0 2 0.00 2 85 0 3 0.00 3 86 0 3 0.00 3 87 0 2 0.00 2 88 0 1 0.00 1 89 0 1 0.00 1 90 0 1 0.00 1 91 0 1 0.00 1 92 0 2 0.00 2 93 0 2 0.00 2 94 0 3 0.00 3 95 0 3 0.00 3 96 0 4 0.00 4 97 0 2 0.00 2 98 0 0 0 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 8 11.11 9 2 2 6 25.00 8 3 3 11 21.43 14 4 4 9 30.77 13 5 0 23 0.00 23 6 0 24 0.00 24 7 0 10 0.00 10 8 0 15 0.00 15 9 0 18 0.00 18 10 0 12 0.00 12 11 0 15 0.00 15 12 0 11 0.00 11 13 0 9 0.00 9 14 0 11 0.00 11 15 0 14 0.00 14 16 0 16 0.00 16 17 0 15 0.00 15 18 1 9 10.00 10 19 0 10 0.00 10 20 0 10 0.00 10 21 0 11 0.00 11 22 0 14 0.00 14 23 0 14 0.00 14 24 1 10 9.09 11 25 0 3 0.00 3 26 0 6 0.00 6 27 0 12 0.00 12 28 1 10 9.09 11 29 0 12 0.00 12 30 0 7 0.00 7 31 0 10 0.00 10 32 1 11 8.33 12 33 0 8 0.00 8 34 0 4 0.00 4 35 0 3 0.00 3 36 0 10 0.00 10 37 0 5 0.00 5 38 0 8 0.00 8 39 0 9 0.00 9 40 0 8 0.00 8 41 0 13 0.00 13 42 0 5 0.00 5 43 0 7 0.00 7 44 0 11 0.00 11 45 0 5 0.00 5 46 0 2 0.00 2 47 1 10 9.09 11 48 0 9 0.00 9 49 0 8 0.00 8 50 0 7 0.00 7 51 0 6 0.00 6 52 0 8 0.00 8 53 0 8 0.00 8 54 0 8 0.00 8 55 0 4 0.00 4 56 0 9 0.00 9 57 0 4 0.00 4 58 0 7 0.00 7 59 1 7 12.50 8 60 0 2 0.00 2 61 0 6 0.00 6 62 0 9 0.00 9 63 0 3 0.00 3 64 0 8 0.00 8 65 0 7 0.00 7 66 0 5 0.00 5 67 0 2 0.00 2 68 0 9 0.00 9 69 0 7 0.00 7 70 0 5 0.00 5 71 0 6 0.00 6 72 0 5 0.00 5 73 0 3 0.00 3 74 0 5 0.00 5 75 0 5 0.00 5 76 0 3 0.00 3 77 0 2 0.00 2 78 0 5 0.00 5 79 0 3 0.00 3 80 0 4 0.00 4 81 0 5 0.00 5 82 0 4 0.00 4 83 0 3 0.00 3 84 0 2 0.00 2 85 0 7 0.00 7 86 1 4 20.00 5 87 0 1 0.00 1 88 0 1 0.00 1 89 0 5 0.00 5 90 0 2 0.00 2 91 0 1 0.00 1 92 0 1 0.00 1 93 0 3 0.00 3 94 0 3 0.00 3 95 0 3 0.00 3 96 0 2 0.00 2 97 0 2 0.00 2 98 0 5 0.00 5 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3 8 27.27 11 2 3 9 25.00 12 3 1 3 25.00 4 4 0 4 0.00 4 5 0 11 0.00 11 6 0 18 0.00 18 7 0 15 0.00 15 8 0 22 0.00 22 9 0 20 0.00 20 10 0 27 0.00 27 11 0 24 0.00 24 12 0 20 0.00 20 13 0 21 0.00 21 14 0 25 0.00 25 15 0 27 0.00 27 16 0 24 0.00 24 17 0 25 0.00 25 18 1 16 5.88 17 19 1 10 9.09 11 20 0 17 0.00 17 21 0 18 0.00 18 22 0 19 0.00 19 23 0 23 0.00 23 24 0 16 0.00 16 25 1 14 6.67 15 26 0 24 0.00 24 27 0 13 0.00 13 28 0 20 0.00 20 29 0 21 0.00 21 30 0 20 0.00 20 31 0 13 0.00 13 32 0 18 0.00 18 33 0 15 0.00 15 34 0 17 0.00 17 35 1 16 5.88 17 36 0 26 0.00 26 37 0 16 0.00 16 38 0 17 0.00 17 39 0 24 0.00 24 40 0 17 0.00 17 41 0 14 0.00 14 42 0 15 0.00 15 43 0 13 0.00 13 44 0 17 0.00 17 45 0 17 0.00 17 46 0 12 0.00 12 47 0 18 0.00 18 48 0 15 0.00 15 49 0 11 0.00 11 50 0 14 0.00 14 51 0 13 0.00 13 52 0 12 0.00 12 53 0 11 0.00 11 54 0 13 0.00 13 55 0 8 0.00 8 56 0 17 0.00 17 57 0 9 0.00 9 58 0 9 0.00 9 59 0 13 0.00 13 60 0 14 0.00 14 61 0 12 0.00 12 62 0 12 0.00 12 63 0 11 0.00 11 64 0 10 0.00 10 65 0 7 0.00 7 66 0 10 0.00 10 67 0 7 0.00 7 68 0 11 0.00 11 69 1 8 11.11 9 70 0 9 0.00 9 71 0 8 0.00 8 72 0 5 0.00 5 73 1 6 14.29 7 74 0 7 0.00 7 75 0 11 0.00 11 76 0 7 0.00 7 77 0 12 0.00 12 78 0 10 0.00 10 79 0 9 0.00 9 80 0 5 0.00 5 81 0 5 0.00 5 82 0 4 0.00 4 83 0 9 0.00 9 84 0 6 0.00 6 85 0 6 0.00 6 86 0 7 0.00 7 87 0 8 0.00 8 88 0 3 0.00 3 89 0 3 0.00 3 90 1 3 25.00 4 91 0 7 0.00 7 92 0 5 0.00 5 93 0 5 0.00 5 94 0 3 0.00 3 95 1 2 33.33 3 96 0 4 0.00 4 97 0 4 0.00 4 98 0 7 0.00 7