CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 0 57 0.00 57 2 1 64 1.54 65 3 1 64 1.54 65 4 1 32 3.03 33 5 2 40 4.76 42 6 0 27 0.00 27 7 2 28 6.67 30 8 0 38 0.00 38 9 0 24 0.00 24 10 0 39 0.00 39 11 0 30 0.00 30 12 0 39 0.00 39 13 0 29 0.00 29 14 0 39 0.00 39 15 0 27 0.00 27 16 0 28 0.00 28 17 0 39 0.00 39 18 1 32 3.03 33 19 0 31 0.00 31 20 1 32 3.03 33 21 0 44 0.00 44 22 0 35 0.00 35 23 0 34 0.00 34 24 1 30 3.23 31 25 0 39 0.00 39 26 0 34 0.00 34 27 0 47 0.00 47 28 0 36 0.00 36 29 0 28 0.00 28 30 0 33 0.00 33 31 0 38 0.00 38 32 0 44 0.00 44 33 0 39 0.00 39 34 0 29 0.00 29 35 0 37 0.00 37 36 0 42 0.00 42 37 1 35 2.78 36 38 0 37 0.00 37 39 0 37 0.00 37 40 0 41 0.00 41 41 0 30 0.00 30 42 0 26 0.00 26 43 0 29 0.00 29 44 0 31 0.00 31 45 0 26 0.00 26 46 0 35 0.00 35 47 0 34 0.00 34 48 0 26 0.00 26 49 0 46 0.00 46 50 0 30 0.00 30 51 0 24 0.00 24 52 1 33 2.94 34 53 1 24 4.00 25 54 0 35 0.00 35 55 0 36 0.00 36 56 1 43 2.27 44 57 0 31 0.00 31 58 0 47 0.00 47 59 1 42 2.33 43 60 0 47 0.00 47 61 1 27 3.57 28 62 0 30 0.00 30 63 1 18 5.26 19 64 0 23 0.00 23 65 0 35 0.00 35 66 1 20 4.76 21 67 0 29 0.00 29 68 0 24 0.00 24 69 0 29 0.00 29 70 2 21 8.70 23 71 0 32 0.00 32 72 0 27 0.00 27 73 0 24 0.00 24 74 0 34 0.00 34 75 0 28 0.00 28 76 0 37 0.00 37 77 0 20 0.00 20 78 0 27 0.00 27 79 0 41 0.00 41 80 1 15 6.25 16 81 1 36 2.70 37 82 1 25 3.85 26 83 0 34 0.00 34 84 0 21 0.00 21 85 0 26 0.00 26 86 1 13 7.14 14 87 1 35 2.78 36 88 0 25 0.00 25 89 0 23 0.00 23 90 0 19 0.00 19 91 0 21 0.00 21 92 0 29 0.00 29 93 0 27 0.00 27 94 0 21 0.00 21 95 0 16 0.00 16 96 1 14 6.67 15 97 0 27 0.00 27 98 0 18 0.00 18 99 1 20 4.76 21 100 1 24 4.00 25 101 0 22 0.00 22 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 32 24 57.14 56 2 20 25 44.44 45 3 6 29 17.14 35 4 6 34 15.00 40 5 3 27 10.00 30 6 3 20 13.04 23 7 3 46 6.12 49 8 1 35 2.78 36 9 0 26 0.00 26 10 0 33 0.00 33 11 1 38 2.56 39 12 0 39 0.00 39 13 0 37 0.00 37 14 0 36 0.00 36 15 2 24 7.69 26 16 0 42 0.00 42 17 0 41 0.00 41 18 0 22 0.00 22 19 1 26 3.70 27 20 0 33 0.00 33 21 1 29 3.33 30 22 1 34 2.86 35 23 0 36 0.00 36 24 0 29 0.00 29 25 0 48 0.00 48 26 0 36 0.00 36 27 0 38 0.00 38 28 0 33 0.00 33 29 1 37 2.63 38 30 1 32 3.03 33 31 1 38 2.56 39 32 0 34 0.00 34 33 0 43 0.00 43 34 0 40 0.00 40 35 2 41 4.65 43 36 0 40 0.00 40 37 1 41 2.38 42 38 0 35 0.00 35 39 1 36 2.70 37 40 0 40 0.00 40 41 0 30 0.00 30 42 0 50 0.00 50 43 1 33 2.94 34 44 0 35 0.00 35 45 1 34 2.86 35 46 0 29 0.00 29 47 1 27 3.57 28 48 2 40 4.76 42 49 1 27 3.57 28 50 0 33 0.00 33 51 0 33 0.00 33 52 0 31 0.00 31 53 1 29 3.33 30 54 2 26 7.14 28 55 0 32 0.00 32 56 0 35 0.00 35 57 0 35 0.00 35 58 1 36 2.70 37 59 1 34 2.86 35 60 0 28 0.00 28 61 1 35 2.78 36 62 1 28 3.45 29 63 3 25 10.71 28 64 0 45 0.00 45 65 0 25 0.00 25 66 0 29 0.00 29 67 0 43 0.00 43 68 0 21 0.00 21 69 0 25 0.00 25 70 1 33 2.94 34 71 0 29 0.00 29 72 1 35 2.78 36 73 2 29 6.45 31 74 0 30 0.00 30 75 1 33 2.94 34 76 1 22 4.35 23 77 1 24 4.00 25 78 0 31 0.00 31 79 1 34 2.86 35 80 2 22 8.33 24 81 0 20 0.00 20 82 0 34 0.00 34 83 0 31 0.00 31 84 1 33 2.94 34 85 0 21 0.00 21 86 0 24 0.00 24 87 0 27 0.00 27 88 1 24 4.00 25 89 1 22 4.35 23 90 0 19 0.00 19 91 1 15 6.25 16 92 0 21 0.00 21 93 0 23 0.00 23 94 0 24 0.00 24 95 0 14 0.00 14 96 0 24 0.00 24 97 0 15 0.00 15 98 2 24 7.69 26 99 1 17 5.56 18 100 0 17 0.00 17 101 0 18 0.00 18 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 6 11 35.29 17 2 5 12 29.41 17 3 6 33 15.38 39 4 0 31 0.00 31 5 2 30 6.25 32 6 0 46 0.00 46 7 1 55 1.79 56 8 0 44 0.00 44 9 0 39 0.00 39 10 1 46 2.13 47 11 1 47 2.08 48 12 0 52 0.00 52 13 0 49 0.00 49 14 0 49 0.00 49 15 0 58 0.00 58 16 0 63 0.00 63 17 1 46 2.13 47 18 0 53 0.00 53 19 0 65 0.00 65 20 1 44 2.22 45 21 0 55 0.00 55 22 2 50 3.85 52 23 1 48 2.04 49 24 0 57 0.00 57 25 1 56 1.75 57 26 0 50 0.00 50 27 1 57 1.72 58 28 1 61 1.61 62 29 3 50 5.66 53 30 0 47 0.00 47 31 1 56 1.75 57 32 0 72 0.00 72 33 1 63 1.56 64 34 0 55 0.00 55 35 1 58 1.69 59 36 0 48 0.00 48 37 0 39 0.00 39 38 0 60 0.00 60 39 0 53 0.00 53 40 1 42 2.33 43 41 1 53 1.85 54 42 0 52 0.00 52 43 0 59 0.00 59 44 1 53 1.85 54 45 0 64 0.00 64 46 2 56 3.45 58 47 0 46 0.00 46 48 0 57 0.00 57 49 2 54 3.57 56 50 0 61 0.00 61 51 1 52 1.89 53 52 0 68 0.00 68 53 0 63 0.00 63 54 0 58 0.00 58 55 1 54 1.82 55 56 0 36 0.00 36 57 1 48 2.04 49 58 0 43 0.00 43 59 1 38 2.56 39 60 1 46 2.13 47 61 0 41 0.00 41 62 0 61 0.00 61 63 1 60 1.64 61 64 1 47 2.08 48 65 0 42 0.00 42 66 0 44 0.00 44 67 0 37 0.00 37 68 1 40 2.44 41 69 0 42 0.00 42 70 0 45 0.00 45 71 0 47 0.00 47 72 1 53 1.85 54 73 1 36 2.70 37 74 1 50 1.96 51 75 0 47 0.00 47 76 0 45 0.00 45 77 0 47 0.00 47 78 0 46 0.00 46 79 0 41 0.00 41 80 0 40 0.00 40 81 1 40 2.44 41 82 0 42 0.00 42 83 0 38 0.00 38 84 0 28 0.00 28 85 0 44 0.00 44 86 0 43 0.00 43 87 2 40 4.76 42 88 1 40 2.44 41 89 1 26 3.70 27 90 0 36 0.00 36 91 0 30 0.00 30 92 1 42 2.33 43 93 1 36 2.70 37 94 0 30 0.00 30 95 0 35 0.00 35 96 1 33 2.94 34 97 0 43 0.00 43 98 0 20 0.00 20 99 0 22 0.00 22 100 0 15 0.00 15 101 1 33 2.94 34 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3 17 15.00 20 2 4 13 23.53 17 3 3 25 10.71 28 4 7 28 20.00 35 5 0 34 0.00 34 6 0 23 0.00 23 7 0 24 0.00 24 8 0 20 0.00 20 9 0 28 0.00 28 10 0 19 0.00 19 11 0 15 0.00 15 12 0 20 0.00 20 13 0 21 0.00 21 14 0 16 0.00 16 15 0 18 0.00 18 16 0 13 0.00 13 17 0 22 0.00 22 18 0 15 0.00 15 19 0 20 0.00 20 20 0 24 0.00 24 21 0 21 0.00 21 22 0 16 0.00 16 23 0 17 0.00 17 24 0 17 0.00 17 25 1 14 6.67 15 26 0 17 0.00 17 27 0 14 0.00 14 28 0 13 0.00 13 29 1 10 9.09 11 30 0 14 0.00 14 31 0 17 0.00 17 32 0 16 0.00 16 33 0 13 0.00 13 34 0 9 0.00 9 35 0 7 0.00 7 36 0 18 0.00 18 37 0 15 0.00 15 38 0 15 0.00 15 39 0 15 0.00 15 40 1 7 12.50 8 41 0 10 0.00 10 42 0 9 0.00 9 43 0 14 0.00 14 44 0 12 0.00 12 45 0 5 0.00 5 46 0 10 0.00 10 47 0 7 0.00 7 48 0 15 0.00 15 49 0 6 0.00 6 50 0 14 0.00 14 51 0 5 0.00 5 52 0 12 0.00 12 53 1 6 14.29 7 54 0 8 0.00 8 55 0 7 0.00 7 56 0 6 0.00 6 57 0 3 0.00 3 58 0 13 0.00 13 59 0 6 0.00 6 60 0 6 0.00 6 61 0 5 0.00 5 62 0 5 0.00 5 63 0 14 0.00 14 64 0 8 0.00 8 65 0 7 0.00 7 66 0 7 0.00 7 67 0 10 0.00 10 68 0 8 0.00 8 69 0 5 0.00 5 70 0 9 0.00 9 71 0 4 0.00 4 72 0 8 0.00 8 73 0 7 0.00 7 74 0 11 0.00 11 75 0 2 0.00 2 76 0 8 0.00 8 77 0 5 0.00 5 78 0 8 0.00 8 79 0 3 0.00 3 80 0 13 0.00 13 81 0 5 0.00 5 82 0 6 0.00 6 83 1 10 9.09 11 84 0 6 0.00 6 85 0 5 0.00 5 86 0 7 0.00 7 87 0 5 0.00 5 88 0 5 0.00 5 89 0 4 0.00 4 90 0 4 0.00 4 91 0 5 0.00 5 92 0 5 0.00 5 93 0 5 0.00 5 94 0 4 0.00 4 95 0 6 0.00 6 96 0 5 0.00 5 97 0 5 0.00 5 98 0 4 0.00 4 99 0 0 0 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3 9 25.00 12 2 6 13 31.58 19 3 2 23 8.00 25 4 8 14 36.36 22 5 0 21 0.00 21 6 0 36 0.00 36 7 0 23 0.00 23 8 0 21 0.00 21 9 1 23 4.17 24 10 0 24 0.00 24 11 0 19 0.00 19 12 0 16 0.00 16 13 0 21 0.00 21 14 0 27 0.00 27 15 1 17 5.56 18 16 0 12 0.00 12 17 1 28 3.45 29 18 0 24 0.00 24 19 1 13 7.14 14 20 0 12 0.00 12 21 0 8 0.00 8 22 0 19 0.00 19 23 0 12 0.00 12 24 0 15 0.00 15 25 0 17 0.00 17 26 1 14 6.67 15 27 0 11 0.00 11 28 0 19 0.00 19 29 1 15 6.25 16 30 0 20 0.00 20 31 0 13 0.00 13 32 1 16 5.88 17 33 0 14 0.00 14 34 0 7 0.00 7 35 0 7 0.00 7 36 0 21 0.00 21 37 0 14 0.00 14 38 0 11 0.00 11 39 1 16 5.88 17 40 0 13 0.00 13 41 0 12 0.00 12 42 0 10 0.00 10 43 0 13 0.00 13 44 0 13 0.00 13 45 0 19 0.00 19 46 0 10 0.00 10 47 0 14 0.00 14 48 0 8 0.00 8 49 1 16 5.88 17 50 0 11 0.00 11 51 0 12 0.00 12 52 0 7 0.00 7 53 0 11 0.00 11 54 0 6 0.00 6 55 1 9 10.00 10 56 0 8 0.00 8 57 1 8 11.11 9 58 0 6 0.00 6 59 0 9 0.00 9 60 1 4 20.00 5 61 0 10 0.00 10 62 0 9 0.00 9 63 0 8 0.00 8 64 0 13 0.00 13 65 0 7 0.00 7 66 0 5 0.00 5 67 0 6 0.00 6 68 2 11 15.38 13 69 0 13 0.00 13 70 0 8 0.00 8 71 0 10 0.00 10 72 0 14 0.00 14 73 0 11 0.00 11 74 0 8 0.00 8 75 0 5 0.00 5 76 0 7 0.00 7 77 0 7 0.00 7 78 1 3 25.00 4 79 0 9 0.00 9 80 0 6 0.00 6 81 0 5 0.00 5 82 0 2 0.00 2 83 0 5 0.00 5 84 0 9 0.00 9 85 0 10 0.00 10 86 0 6 0.00 6 87 0 7 0.00 7 88 0 6 0.00 6 89 0 5 0.00 5 90 0 1 0.00 1 91 0 2 0.00 2 92 0 4 0.00 4 93 2 4 33.33 6 94 0 5 0.00 5 95 1 4 20.00 5 96 0 3 0.00 3 97 0 6 0.00 6 98 0 3 0.00 3 99 0 0 0 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3 7 30.00 10 2 2 9 18.18 11 3 3 6 33.33 9 4 0 7 0.00 7 5 0 16 0.00 16 6 0 29 0.00 29 7 0 25 0.00 25 8 0 39 0.00 39 9 0 31 0.00 31 10 0 40 0.00 40 11 0 34 0.00 34 12 0 31 0.00 31 13 1 32 3.03 33 14 0 39 0.00 39 15 0 40 0.00 40 16 1 18 5.26 19 17 0 30 0.00 30 18 0 28 0.00 28 19 0 21 0.00 21 20 0 15 0.00 15 21 0 24 0.00 24 22 0 27 0.00 27 23 0 26 0.00 26 24 1 19 5.00 20 25 0 19 0.00 19 26 0 23 0.00 23 27 0 15 0.00 15 28 0 31 0.00 31 29 0 28 0.00 28 30 0 20 0.00 20 31 0 20 0.00 20 32 0 15 0.00 15 33 0 30 0.00 30 34 0 37 0.00 37 35 0 18 0.00 18 36 0 21 0.00 21 37 0 21 0.00 21 38 0 22 0.00 22 39 2 29 6.45 31 40 0 21 0.00 21 41 0 16 0.00 16 42 0 16 0.00 16 43 0 24 0.00 24 44 0 24 0.00 24 45 0 20 0.00 20 46 0 17 0.00 17 47 0 10 0.00 10 48 0 16 0.00 16 49 0 18 0.00 18 50 0 21 0.00 21 51 0 18 0.00 18 52 0 17 0.00 17 53 0 16 0.00 16 54 0 16 0.00 16 55 1 13 7.14 14 56 0 19 0.00 19 57 0 17 0.00 17 58 0 22 0.00 22 59 0 14 0.00 14 60 0 15 0.00 15 61 0 13 0.00 13 62 0 9 0.00 9 63 0 14 0.00 14 64 0 18 0.00 18 65 0 13 0.00 13 66 0 15 0.00 15 67 0 9 0.00 9 68 0 13 0.00 13 69 0 11 0.00 11 70 0 17 0.00 17 71 0 13 0.00 13 72 0 12 0.00 12 73 0 10 0.00 10 74 0 14 0.00 14 75 1 12 7.69 13 76 0 11 0.00 11 77 0 15 0.00 15 78 0 11 0.00 11 79 0 16 0.00 16 80 0 17 0.00 17 81 1 4 20.00 5 82 0 14 0.00 14 83 0 12 0.00 12 84 0 11 0.00 11 85 0 8 0.00 8 86 0 12 0.00 12 87 0 10 0.00 10 88 0 16 0.00 16 89 0 6 0.00 6 90 0 8 0.00 8 91 0 8 0.00 8 92 0 8 0.00 8 93 0 4 0.00 4 94 1 12 7.69 13 95 0 7 0.00 7 96 0 7 0.00 7 97 0 5 0.00 5 98 0 5 0.00 5 99 1 0 100.00 1