EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 778 lines in total Total number of methylation call strings processed: 1556 Final Cytosine Methylation Report ================================= Total number of C's analysed: 25908 Total methylated C's in CpG context: 141 Total methylated C's in CHG context: 274 Total methylated C's in CHH context: 229 Total C to T conversions in CpG context: 7575 Total C to T conversions in CHG context: 7400 Total C to T conversions in CHH context: 10289 C methylated in CpG context: 1.8% C methylated in CHG context: 3.6% C methylated in CHH context: 2.2%