EPI-161_S8_L002_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 533 lines in total Total number of methylation call strings processed: 1066 Final Cytosine Methylation Report ================================= Total number of C's analysed: 13454 Total methylated C's in CpG context: 56 Total methylated C's in CHG context: 130 Total methylated C's in CHH context: 61 Total C to T conversions in CpG context: 3815 Total C to T conversions in CHG context: 3620 Total C to T conversions in CHH context: 5772 C methylated in CpG context: 1.4% C methylated in CHG context: 3.5% C methylated in CHH context: 1.0%