EPI-127_S33_L005_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 454 lines in total Total number of methylation call strings processed: 908 Final Cytosine Methylation Report ================================= Total number of C's analysed: 13318 Total methylated C's in CpG context: 35 Total methylated C's in CHG context: 121 Total methylated C's in CHH context: 37 Total C to T conversions in CpG context: 3839 Total C to T conversions in CHG context: 3702 Total C to T conversions in CHH context: 5584 C methylated in CpG context: 0.9% C methylated in CHG context: 3.2% C methylated in CHH context: 0.7%