CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 3 61 4.69 64 2 2 87 2.25 89 3 0 74 0.00 74 4 0 41 0.00 41 5 0 44 0.00 44 6 0 33 0.00 33 7 1 46 2.13 47 8 0 30 0.00 30 9 0 31 0.00 31 10 0 45 0.00 45 11 0 38 0.00 38 12 0 37 0.00 37 13 0 32 0.00 32 14 0 53 0.00 53 15 0 39 0.00 39 16 0 34 0.00 34 17 0 43 0.00 43 18 0 31 0.00 31 19 0 50 0.00 50 20 0 46 0.00 46 21 1 41 2.38 42 22 0 47 0.00 47 23 0 42 0.00 42 24 0 37 0.00 37 25 0 34 0.00 34 26 0 50 0.00 50 27 0 47 0.00 47 28 0 44 0.00 44 29 0 38 0.00 38 30 0 36 0.00 36 31 0 34 0.00 34 32 0 31 0.00 31 33 0 31 0.00 31 34 1 40 2.44 41 35 0 38 0.00 38 36 0 44 0.00 44 37 0 32 0.00 32 38 0 42 0.00 42 39 0 36 0.00 36 40 1 35 2.78 36 41 0 41 0.00 41 42 0 41 0.00 41 43 0 40 0.00 40 44 0 38 0.00 38 45 2 51 3.77 53 46 0 32 0.00 32 47 1 47 2.08 48 48 0 44 0.00 44 49 0 31 0.00 31 50 0 41 0.00 41 51 0 55 0.00 55 52 0 36 0.00 36 53 0 35 0.00 35 54 1 40 2.44 41 55 1 39 2.50 40 56 1 35 2.78 36 57 0 42 0.00 42 58 0 45 0.00 45 59 0 44 0.00 44 60 0 31 0.00 31 61 1 37 2.63 38 62 0 43 0.00 43 63 0 24 0.00 24 64 0 37 0.00 37 65 0 40 0.00 40 66 0 34 0.00 34 67 0 36 0.00 36 68 0 33 0.00 33 69 1 37 2.63 38 70 1 38 2.56 39 71 1 43 2.27 44 72 0 27 0.00 27 73 0 29 0.00 29 74 1 44 2.22 45 75 0 41 0.00 41 76 0 43 0.00 43 77 0 29 0.00 29 78 0 29 0.00 29 79 0 32 0.00 32 80 0 24 0.00 24 81 1 48 2.04 49 82 2 25 7.41 27 83 0 26 0.00 26 84 0 32 0.00 32 85 1 32 3.03 33 86 1 33 2.94 34 87 0 33 0.00 33 88 0 35 0.00 35 89 0 33 0.00 33 90 0 38 0.00 38 91 0 31 0.00 31 92 0 26 0.00 26 93 0 31 0.00 31 94 0 22 0.00 22 95 0 23 0.00 23 96 0 37 0.00 37 97 1 24 4.00 25 98 0 25 0.00 25 99 0 30 0.00 30 100 0 31 0.00 31 101 0 33 0.00 33 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 37 27 57.81 64 2 27 23 54.00 50 3 8 18 30.77 26 4 2 35 5.41 37 5 1 29 3.33 30 6 1 24 4.00 25 7 2 51 3.77 53 8 1 32 3.03 33 9 2 37 5.13 39 10 0 51 0.00 51 11 0 47 0.00 47 12 0 30 0.00 30 13 2 38 5.00 40 14 0 39 0.00 39 15 0 36 0.00 36 16 0 34 0.00 34 17 0 44 0.00 44 18 0 51 0.00 51 19 0 34 0.00 34 20 1 41 2.38 42 21 1 42 2.33 43 22 0 38 0.00 38 23 0 38 0.00 38 24 0 38 0.00 38 25 1 46 2.13 47 26 1 36 2.70 37 27 0 49 0.00 49 28 0 46 0.00 46 29 0 50 0.00 50 30 0 34 0.00 34 31 3 50 5.66 53 32 1 42 2.33 43 33 0 47 0.00 47 34 0 38 0.00 38 35 1 47 2.08 48 36 0 41 0.00 41 37 0 45 0.00 45 38 0 35 0.00 35 39 0 38 0.00 38 40 1 61 1.61 62 41 0 48 0.00 48 42 0 34 0.00 34 43 0 38 0.00 38 44 0 45 0.00 45 45 0 34 0.00 34 46 1 36 2.70 37 47 2 56 3.45 58 48 0 34 0.00 34 49 0 27 0.00 27 50 1 39 2.50 40 51 0 46 0.00 46 52 0 34 0.00 34 53 0 37 0.00 37 54 1 37 2.63 38 55 0 39 0.00 39 56 0 41 0.00 41 57 0 37 0.00 37 58 0 43 0.00 43 59 0 43 0.00 43 60 0 39 0.00 39 61 0 51 0.00 51 62 1 31 3.12 32 63 0 31 0.00 31 64 0 55 0.00 55 65 0 27 0.00 27 66 0 35 0.00 35 67 0 39 0.00 39 68 3 29 9.38 32 69 1 38 2.56 39 70 2 50 3.85 52 71 1 35 2.78 36 72 0 37 0.00 37 73 0 31 0.00 31 74 1 38 2.56 39 75 0 44 0.00 44 76 0 29 0.00 29 77 0 42 0.00 42 78 1 42 2.33 43 79 0 27 0.00 27 80 0 31 0.00 31 81 0 33 0.00 33 82 1 28 3.45 29 83 0 39 0.00 39 84 1 27 3.57 28 85 0 29 0.00 29 86 1 39 2.50 40 87 0 15 0.00 15 88 1 29 3.33 30 89 0 28 0.00 28 90 3 23 11.54 26 91 0 27 0.00 27 92 0 27 0.00 27 93 1 24 4.00 25 94 0 39 0.00 39 95 1 34 2.86 35 96 0 31 0.00 31 97 0 20 0.00 20 98 0 36 0.00 36 99 0 14 0.00 14 100 0 19 0.00 19 101 2 29 6.45 31 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 5 7 41.67 12 2 4 10 28.57 14 3 1 38 2.56 39 4 1 29 3.33 30 5 1 49 2.00 50 6 1 51 1.92 52 7 0 49 0.00 49 8 1 65 1.52 66 9 0 43 0.00 43 10 0 43 0.00 43 11 0 44 0.00 44 12 1 48 2.04 49 13 0 59 0.00 59 14 0 54 0.00 54 15 0 46 0.00 46 16 0 70 0.00 70 17 0 57 0.00 57 18 1 54 1.82 55 19 1 63 1.56 64 20 0 61 0.00 61 21 0 58 0.00 58 22 0 71 0.00 71 23 1 73 1.35 74 24 2 78 2.50 80 25 0 71 0.00 71 26 0 83 0.00 83 27 0 57 0.00 57 28 0 86 0.00 86 29 0 83 0.00 83 30 0 83 0.00 83 31 1 78 1.27 79 32 1 86 1.15 87 33 0 66 0.00 66 34 2 74 2.63 76 35 0 68 0.00 68 36 0 65 0.00 65 37 0 50 0.00 50 38 0 61 0.00 61 39 0 61 0.00 61 40 0 68 0.00 68 41 0 65 0.00 65 42 0 48 0.00 48 43 0 66 0.00 66 44 0 69 0.00 69 45 0 64 0.00 64 46 0 70 0.00 70 47 1 76 1.30 77 48 1 73 1.35 74 49 1 59 1.67 60 50 0 64 0.00 64 51 1 53 1.85 54 52 1 58 1.69 59 53 0 76 0.00 76 54 0 58 0.00 58 55 0 66 0.00 66 56 0 65 0.00 65 57 0 54 0.00 54 58 0 56 0.00 56 59 0 54 0.00 54 60 0 59 0.00 59 61 0 54 0.00 54 62 0 58 0.00 58 63 0 61 0.00 61 64 0 60 0.00 60 65 0 56 0.00 56 66 0 48 0.00 48 67 0 60 0.00 60 68 1 60 1.64 61 69 0 57 0.00 57 70 1 64 1.54 65 71 0 51 0.00 51 72 0 61 0.00 61 73 0 54 0.00 54 74 1 65 1.52 66 75 0 54 0.00 54 76 0 47 0.00 47 77 0 63 0.00 63 78 2 59 3.28 61 79 0 55 0.00 55 80 1 52 1.89 53 81 0 57 0.00 57 82 1 49 2.00 50 83 0 47 0.00 47 84 1 46 2.13 47 85 0 48 0.00 48 86 0 51 0.00 51 87 0 46 0.00 46 88 0 56 0.00 56 89 0 51 0.00 51 90 1 47 2.08 48 91 0 54 0.00 54 92 1 58 1.69 59 93 0 43 0.00 43 94 0 44 0.00 44 95 0 41 0.00 41 96 1 43 2.27 44 97 0 40 0.00 40 98 1 35 2.78 36 99 0 26 0.00 26 100 0 32 0.00 32 101 0 44 0.00 44 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8 33 19.51 41 2 4 23 14.81 27 3 1 35 2.78 36 4 4 36 10.00 40 5 0 41 0.00 41 6 0 28 0.00 28 7 0 27 0.00 27 8 0 20 0.00 20 9 1 20 4.76 21 10 0 33 0.00 33 11 0 19 0.00 19 12 0 28 0.00 28 13 0 25 0.00 25 14 0 17 0.00 17 15 0 17 0.00 17 16 1 21 4.55 22 17 0 19 0.00 19 18 0 29 0.00 29 19 0 13 0.00 13 20 0 25 0.00 25 21 0 25 0.00 25 22 0 23 0.00 23 23 0 22 0.00 22 24 0 16 0.00 16 25 0 16 0.00 16 26 0 27 0.00 27 27 1 21 4.55 22 28 0 14 0.00 14 29 0 19 0.00 19 30 0 19 0.00 19 31 0 17 0.00 17 32 0 19 0.00 19 33 1 16 5.88 17 34 0 20 0.00 20 35 0 16 0.00 16 36 0 19 0.00 19 37 0 20 0.00 20 38 0 15 0.00 15 39 0 15 0.00 15 40 0 19 0.00 19 41 0 11 0.00 11 42 0 13 0.00 13 43 0 15 0.00 15 44 0 14 0.00 14 45 0 18 0.00 18 46 1 11 8.33 12 47 0 20 0.00 20 48 0 8 0.00 8 49 0 16 0.00 16 50 0 6 0.00 6 51 0 11 0.00 11 52 0 13 0.00 13 53 0 9 0.00 9 54 0 12 0.00 12 55 0 7 0.00 7 56 0 12 0.00 12 57 0 9 0.00 9 58 0 8 0.00 8 59 0 9 0.00 9 60 0 6 0.00 6 61 0 16 0.00 16 62 0 7 0.00 7 63 0 11 0.00 11 64 0 5 0.00 5 65 1 18 5.26 19 66 0 10 0.00 10 67 0 10 0.00 10 68 0 5 0.00 5 69 0 11 0.00 11 70 0 7 0.00 7 71 0 5 0.00 5 72 0 10 0.00 10 73 0 8 0.00 8 74 0 16 0.00 16 75 0 8 0.00 8 76 0 12 0.00 12 77 0 9 0.00 9 78 0 8 0.00 8 79 0 12 0.00 12 80 0 12 0.00 12 81 0 10 0.00 10 82 0 11 0.00 11 83 0 8 0.00 8 84 0 7 0.00 7 85 0 10 0.00 10 86 0 9 0.00 9 87 0 10 0.00 10 88 0 5 0.00 5 89 0 7 0.00 7 90 0 7 0.00 7 91 0 4 0.00 4 92 0 4 0.00 4 93 0 3 0.00 3 94 0 4 0.00 4 95 0 9 0.00 9 96 0 4 0.00 4 97 0 10 0.00 10 98 0 5 0.00 5 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3 12 20.00 15 2 4 15 21.05 19 3 7 27 20.59 34 4 7 26 21.21 33 5 1 50 1.96 51 6 0 29 0.00 29 7 0 26 0.00 26 8 0 26 0.00 26 9 0 23 0.00 23 10 0 28 0.00 28 11 0 16 0.00 16 12 0 23 0.00 23 13 1 21 4.55 22 14 0 29 0.00 29 15 0 23 0.00 23 16 0 19 0.00 19 17 0 23 0.00 23 18 2 20 9.09 22 19 1 25 3.85 26 20 0 15 0.00 15 21 0 15 0.00 15 22 1 29 3.33 30 23 1 11 8.33 12 24 1 16 5.88 17 25 0 26 0.00 26 26 0 23 0.00 23 27 0 33 0.00 33 28 0 13 0.00 13 29 0 21 0.00 21 30 0 23 0.00 23 31 0 15 0.00 15 32 0 16 0.00 16 33 0 31 0.00 31 34 0 12 0.00 12 35 0 14 0.00 14 36 0 17 0.00 17 37 0 19 0.00 19 38 2 12 14.29 14 39 0 19 0.00 19 40 0 10 0.00 10 41 0 18 0.00 18 42 0 13 0.00 13 43 0 10 0.00 10 44 0 21 0.00 21 45 0 9 0.00 9 46 0 16 0.00 16 47 0 17 0.00 17 48 0 22 0.00 22 49 0 13 0.00 13 50 0 16 0.00 16 51 0 18 0.00 18 52 0 14 0.00 14 53 0 13 0.00 13 54 0 7 0.00 7 55 0 7 0.00 7 56 0 14 0.00 14 57 0 16 0.00 16 58 0 7 0.00 7 59 0 11 0.00 11 60 0 9 0.00 9 61 0 16 0.00 16 62 0 16 0.00 16 63 0 11 0.00 11 64 0 14 0.00 14 65 0 10 0.00 10 66 0 12 0.00 12 67 0 11 0.00 11 68 1 9 10.00 10 69 0 17 0.00 17 70 0 11 0.00 11 71 0 11 0.00 11 72 0 9 0.00 9 73 0 11 0.00 11 74 0 16 0.00 16 75 0 12 0.00 12 76 0 9 0.00 9 77 1 8 11.11 9 78 0 10 0.00 10 79 0 11 0.00 11 80 0 10 0.00 10 81 0 8 0.00 8 82 0 10 0.00 10 83 0 5 0.00 5 84 0 11 0.00 11 85 0 11 0.00 11 86 0 9 0.00 9 87 0 9 0.00 9 88 0 5 0.00 5 89 0 7 0.00 7 90 0 8 0.00 8 91 0 7 0.00 7 92 0 3 0.00 3 93 0 5 0.00 5 94 0 8 0.00 8 95 0 7 0.00 7 96 0 3 0.00 3 97 1 6 14.29 7 98 0 8 0.00 8 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4 20 16.67 24 2 3 14 17.65 17 3 2 7 22.22 9 4 3 7 30.00 10 5 0 24 0.00 24 6 0 28 0.00 28 7 0 44 0.00 44 8 0 46 0.00 46 9 1 41 2.38 42 10 0 46 0.00 46 11 0 33 0.00 33 12 0 28 0.00 28 13 0 44 0.00 44 14 0 31 0.00 31 15 0 51 0.00 51 16 1 39 2.50 40 17 0 31 0.00 31 18 0 29 0.00 29 19 0 39 0.00 39 20 0 24 0.00 24 21 0 30 0.00 30 22 0 37 0.00 37 23 0 29 0.00 29 24 0 39 0.00 39 25 0 26 0.00 26 26 0 31 0.00 31 27 0 25 0.00 25 28 0 40 0.00 40 29 0 32 0.00 32 30 0 21 0.00 21 31 0 22 0.00 22 32 0 20 0.00 20 33 0 33 0.00 33 34 0 31 0.00 31 35 0 22 0.00 22 36 0 33 0.00 33 37 0 22 0.00 22 38 0 24 0.00 24 39 0 29 0.00 29 40 0 30 0.00 30 41 0 22 0.00 22 42 0 31 0.00 31 43 0 26 0.00 26 44 0 27 0.00 27 45 0 28 0.00 28 46 0 26 0.00 26 47 0 23 0.00 23 48 0 26 0.00 26 49 0 24 0.00 24 50 1 21 4.55 22 51 0 23 0.00 23 52 0 21 0.00 21 53 0 16 0.00 16 54 0 28 0.00 28 55 0 21 0.00 21 56 0 20 0.00 20 57 0 23 0.00 23 58 0 17 0.00 17 59 0 14 0.00 14 60 0 20 0.00 20 61 0 16 0.00 16 62 0 11 0.00 11 63 0 13 0.00 13 64 0 15 0.00 15 65 0 16 0.00 16 66 0 12 0.00 12 67 1 20 4.76 21 68 0 14 0.00 14 69 0 21 0.00 21 70 0 16 0.00 16 71 0 23 0.00 23 72 0 9 0.00 9 73 0 15 0.00 15 74 0 14 0.00 14 75 0 20 0.00 20 76 0 20 0.00 20 77 0 24 0.00 24 78 0 15 0.00 15 79 0 17 0.00 17 80 0 17 0.00 17 81 0 10 0.00 10 82 0 10 0.00 10 83 0 20 0.00 20 84 0 12 0.00 12 85 0 14 0.00 14 86 0 15 0.00 15 87 0 14 0.00 14 88 0 15 0.00 15 89 0 15 0.00 15 90 0 17 0.00 17 91 0 12 0.00 12 92 0 14 0.00 14 93 1 15 6.25 16 94 0 14 0.00 14 95 0 16 0.00 16 96 0 5 0.00 5 97 0 10 0.00 10 98 0 10 0.00 10