File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
EPI-151_S2_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	621	99379	0	0	67	554	14731	52	4112	173	4085	63	6246
EPI-152_S3_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	469	99531	0	0	40	429	11618	33	3293	119	3160	55	4958
EPI-153_S4_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	637	99363	0	0	28	609	16860	63	4751	182	4561	108	7195
EPI-154_S5_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	829	99171	0	0	95	734	19966	72	5701	222	5462	91	8418
EPI-159_S6_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	488	99512	0	0	36	452	12096	42	3449	122	3269	55	5159
EPI-160_S7_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	1825	98175	0	0	285	1540	37041	119	10386	404	9934	194	16004
EPI-161_S8_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	587	99413	0	0	54	533	13454	56	3815	130	3620	61	5772
EPI-162_S9_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	615	99385	0	0	38	577	13600	46	3867	163	3658	77	5789
EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	781	99219	0	0	3	778	25908	141	7575	274	7400	229	10289
EPI-168_S11_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	579	99421	0	0	34	545	15205	50	4307	157	4240	81	6370
EPI-169_S12_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	322	99678	0	0	16	306	7462	35	2155	97	1968	37	3170
EPI-170_S13_L002_R1_001_val_1_bismark_bt2_pe.bam	100000	464	99536	0	0	18	446	10292	33	2966	134	2731	51	4377