EPI-170_S13_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 7528619 lines in total Total number of methylation call strings processed: 15057238 Final Cytosine Methylation Report ================================= Total number of C's analysed: 116035249 Total methylated C's in CpG context: 3802971 Total methylated C's in CHG context: 286488 Total methylated C's in CHH context: 1168470 Total C to T conversions in CpG context: 10991404 Total C to T conversions in CHG context: 23293231 Total C to T conversions in CHH context: 76492685 C methylated in CpG context: 25.7% C methylated in CHG context: 1.2% C methylated in CHH context: 1.5%