EPI-169_S12_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 6203096 lines in total Total number of methylation call strings processed: 12406192 Final Cytosine Methylation Report ================================= Total number of C's analysed: 97770671 Total methylated C's in CpG context: 3441248 Total methylated C's in CHG context: 267831 Total methylated C's in CHH context: 1560958 Total C to T conversions in CpG context: 9032975 Total C to T conversions in CHG context: 19939768 Total C to T conversions in CHH context: 63527891 C methylated in CpG context: 27.6% C methylated in CHG context: 1.3% C methylated in CHH context: 2.4%