EPI-161_S8_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 6156942 lines in total Total number of methylation call strings processed: 12313884 Final Cytosine Methylation Report ================================= Total number of C's analysed: 95509068 Total methylated C's in CpG context: 3144991 Total methylated C's in CHG context: 235785 Total methylated C's in CHH context: 1268797 Total C to T conversions in CpG context: 8852963 Total C to T conversions in CHG context: 19018059 Total C to T conversions in CHH context: 62988473 C methylated in CpG context: 26.2% C methylated in CHG context: 1.2% C methylated in CHH context: 2.0%