EPI-160_S7_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 8697606 lines in total Total number of methylation call strings processed: 17395212 Final Cytosine Methylation Report ================================= Total number of C's analysed: 135145113 Total methylated C's in CpG context: 4717929 Total methylated C's in CHG context: 336994 Total methylated C's in CHH context: 1514462 Total C to T conversions in CpG context: 12428913 Total C to T conversions in CHG context: 27286022 Total C to T conversions in CHH context: 88860793 C methylated in CpG context: 27.5% C methylated in CHG context: 1.2% C methylated in CHH context: 1.7%