EPI-159_S6_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 4557124 lines in total Total number of methylation call strings processed: 9114248 Final Cytosine Methylation Report ================================= Total number of C's analysed: 77011929 Total methylated C's in CpG context: 2724982 Total methylated C's in CHG context: 200177 Total methylated C's in CHH context: 1556131 Total C to T conversions in CpG context: 6770348 Total C to T conversions in CHG context: 15236636 Total C to T conversions in CHH context: 50523655 C methylated in CpG context: 28.7% C methylated in CHG context: 1.3% C methylated in CHH context: 3.0%