EPI-153_S4_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 6548869 lines in total Total number of methylation call strings processed: 13097738 Final Cytosine Methylation Report ================================= Total number of C's analysed: 104820913 Total methylated C's in CpG context: 3698740 Total methylated C's in CHG context: 269714 Total methylated C's in CHH context: 1131240 Total C to T conversions in CpG context: 9618215 Total C to T conversions in CHG context: 21506774 Total C to T conversions in CHH context: 68596230 C methylated in CpG context: 27.8% C methylated in CHG context: 1.2% C methylated in CHH context: 1.6%