EPI-151_S2_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 7070246 lines in total Total number of methylation call strings processed: 14140492 Final Cytosine Methylation Report ================================= Total number of C's analysed: 119614793 Total methylated C's in CpG context: 4250403 Total methylated C's in CHG context: 282759 Total methylated C's in CHH context: 1268204 Total C to T conversions in CpG context: 11097048 Total C to T conversions in CHG context: 24489654 Total C to T conversions in CHH context: 78226725 C methylated in CpG context: 27.7% C methylated in CHG context: 1.1% C methylated in CHH context: 1.6%