zr1394_9_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 58 lines in total Total number of methylation call strings processed: 58 Final Cytosine Methylation Report ================================= Total number of C's analysed: 448 Total methylated C's in CpG context: 19 Total methylated C's in CHG context: 15 Total methylated C's in CHH context: 95 Total C to T conversions in CpG context: 30 Total C to T conversions in CHG context: 21 Total C to T conversions in CHH context: 268 C methylated in CpG context: 38.8% C methylated in CHG context: 41.7% C methylated in CHH context: 26.2%