zr1394_8_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 28 lines in total Total number of methylation call strings processed: 28 Final Cytosine Methylation Report ================================= Total number of C's analysed: 195 Total methylated C's in CpG context: 8 Total methylated C's in CHG context: 7 Total methylated C's in CHH context: 45 Total C to T conversions in CpG context: 5 Total C to T conversions in CHG context: 9 Total C to T conversions in CHH context: 121 C methylated in CpG context: 61.5% C methylated in CHG context: 43.8% C methylated in CHH context: 27.1%