zr1394_7_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 43 lines in total Total number of methylation call strings processed: 43 Final Cytosine Methylation Report ================================= Total number of C's analysed: 320 Total methylated C's in CpG context: 9 Total methylated C's in CHG context: 6 Total methylated C's in CHH context: 71 Total C to T conversions in CpG context: 16 Total C to T conversions in CHG context: 13 Total C to T conversions in CHH context: 205 C methylated in CpG context: 36.0% C methylated in CHG context: 31.6% C methylated in CHH context: 25.7%