zr1394_14_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 55 lines in total Total number of methylation call strings processed: 55 Final Cytosine Methylation Report ================================= Total number of C's analysed: 417 Total methylated C's in CpG context: 24 Total methylated C's in CHG context: 15 Total methylated C's in CHH context: 93 Total C to T conversions in CpG context: 24 Total C to T conversions in CHG context: 25 Total C to T conversions in CHH context: 236 C methylated in CpG context: 50.0% C methylated in CHG context: 37.5% C methylated in CHH context: 28.3%